Actinomyces sp. oral taxon 897: C3V41_01190
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Entry
C3V41_01190 CDS
T05399
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acto
Actinomyces sp. oral taxon 897
Pathway
acto03420
Nucleotide excision repair
acto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V41_01190
03430 Mismatch repair
C3V41_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acto03400
]
C3V41_01190
Enzymes [BR:
acto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V41_01190
DNA repair and recombination proteins [BR:
acto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V41_01190
MMR (mismatch excision repair)
Other MMR factors
C3V41_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_12
DEAD
DUF7569
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVM60917
LinkDB
All DBs
Position
279849..282869
Genome browser
AA seq
1006 aa
AA seq
DB search
MNAMNSLFGSLPVSGTQVRPGAQAPAEAALPSLPDPADDSWADVEPPAEDWETEPPAEEA
PPDLGAVAPTWEEHQTGVSALVARARANAARARDAGRREPAGGGATASGPGDAARPYGPG
PLPGLTVADPTTLLADLNPAQAQAVTHAGSPLLIVAGAGSGKTRVLTRRIAHLIATRRAR
PGEILAITFTNKAAAEMRERVTALVGPVGQRMWVSTFHSACVRILRREHAAAGLRSTFSV
YDAADSARLITLVVRELGIDSKRFTPKAFAHRISDLKNELVSPAQFAEEAVTSNPLERHL
AEVYPAYQARLGAANALDFDDLIMRTVQLLRQRPDVAEAYRRRFRHVLVDEYQDTNHAQY
VLVHELIGGPGTSGADSALPPGELTVVGDSDQSIYAFRGATIRNIEEFEKDYPTARTILL
EQNYRSTQNILTAANAVISRNPGRREKNLWTDSGDGPAIIGYVADSEHDEARWVSTEISR
LAEEAGVRPRDVAVFYRTNAQSRALEEAFIRSGQPYKVVGGTRFYERKEIRDAIAYLRAV
DNPDDDVSLRRVLNVPKRGLGDKAEAALGAHASRYSVSFGRAVADAAGEPRPATGSAGAA
QPAPGAQDGTGEVGSGAPGAQEATEPPAVQGLTARATRQVTAFHQLLTGLRHQLAAGDGV
ADILDSALDASGYLAELRASDDPQDAARVENLAELHSVAADFQDANPDGALADFLERVSL
VADSDQLPPGADTQDAHAPDQEQGQVTLMTVHTAKGLEFPVVFVTGLEDGTFPHSRALAE
ETELAEERRLAYVALTRARERLYVTRAAVRSAWGAANAMPASRFLEDIPAQTMEWRRIAS
STDALRGGGTGWGSSWEGGLGGGRGSYGTGGGAGKAAGGRRRPSYDDDFAPPIGSGRPKR
TGRLGRVETPKDRFEARRAERMAKRGRPTRLDGSSAGADGADGGALPAAVAGLKVGDRVR
HDAYGEGDVVALEGAGRSTVARVTFTVDGAKNTKRLMLRLAPIARI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatgaactccctcttcggctccctgcccgtctccggtacgcaggtgcgcccc
ggtgcgcaggcgccggcagaggcggccctgcccagcctgcccgacccggccgacgactcc
tgggccgacgtcgagccccccgccgaggactgggagaccgagcctcccgccgaggaggcg
cccccggacctgggcgccgtcgcccccacctgggaggagcaccagaccggcgtctccgcc
ctcgtcgcacgtgcccgggcgaacgccgcccgcgcccgcgatgccgggaggcgcgagccc
gccgggggcggggccacggcgtcgggccccggggacgcggcacgcccctacggcccaggc
cccctccccgggctcaccgtcgccgaccccaccaccctcctggccgacctcaaccccgcc
caggcccaggccgtcacccacgccggcagccccctgctcatagtggccggcgccgggtcc
ggcaagacccgggtcctgacccgccgcatcgcccacctcatcgccacgcgccgcgcccgc
cccggggagatcctggccatcaccttcaccaacaaggccgccgccgagatgcgcgagagg
gtcaccgccctggtgggcccggtggggcagcgcatgtgggtgtccaccttccactccgcc
tgcgtgcgcatcctgcgccgcgagcacgccgccgccggactgcgctcgaccttctccgtc
tacgacgccgccgactccgcacgcctgatcaccctcgtggtgcgcgagctgggcatcgac
tccaagcgcttcacccccaaggccttcgcgcaccgcatctccgacctcaagaacgagctc
gtcagccccgcccagttcgccgaggaggcggtgacctccaaccccctggaacgccacctg
gccgaggtctaccccgcctaccaggcccgcctgggggccgcgaacgccctggacttcgac
gacctcattatgcgcaccgtccagctcctgcggcagcgccccgatgtggccgaggcctac
cggcgccgcttccgccacgtgctggtcgacgagtaccaggacaccaaccacgcccagtac
gtgctggtccacgagctcatcgggggaccgggcacctccggggccgactcggccctcccc
cccggtgagctgaccgtggtgggggactccgaccagtccatctacgccttccgcggagcc
accatccgcaatatcgaggagttcgagaaggactacccgacggcccgcaccatcctgctg
gagcagaactaccgctccacccagaacatcctcaccgccgccaacgccgtcatctcgcgc
aaccccgggcgccgggagaagaacctgtggaccgactccggcgacgggcccgcgatcatc
ggctacgtggccgactccgagcacgacgaggcccgctgggtcagcaccgagatcagccgc
ctggccgaggaggccggtgtgcgcccgcgcgacgtggccgtcttctaccgcaccaacgcc
cagtcccgtgccctggaggaggccttcatccgctccgggcagccctacaaggtcgtcggc
ggcacccgcttctacgagcgcaaggagatcagggacgccatcgcctacctgcgtgccgtg
gacaaccccgacgacgacgtgtccctgcgtcgcgtcctcaacgtgcccaagcggggcctg
ggggacaaggcggaggcggccctgggcgcgcacgcctccaggtactcggtgagcttcggg
cgcgccgtggccgacgccgccggcgagcctcggcccgccaccgggtcggcaggggcggcg
cagcccgcacccggggcccaggacgggacgggtgaggtgggctccggggcgcccggggcc
caggaggcgaccgagccgcccgccgtccaggggctgaccgcccgggccaccaggcaggtg
actgccttccaccagctccttactggcctgcgccaccagctcgccgccggcgacggcgtc
gccgacatcctcgactccgccctggacgcctccggctacctcgccgagctgcgcgccagc
gacgacccgcaggacgccgcgcgcgtggaaaacctcgccgagctgcactccgtggccgcc
gacttccaggacgccaaccccgacggcgcgctcgccgacttcctggagcgggtcagtctg
gtggccgactccgaccagctccccccgggcgccgacacccaggacgcccacgccccggac
caggagcagggccaggtcaccctcatgaccgtccacaccgccaaggggctggagttcccg
gtcgtcttcgtcaccggcctggaggacgggaccttcccgcactcccgggccctggccgag
gagaccgagctggccgaggaacgccgcctggcctacgtggccctcacccgcgcccgtgag
cgcctctacgtgacccgggccgccgtgcgctccgcctggggggcggccaacgccatgccc
gcctcccgcttcctggaggacatccccgcgcagaccatggagtggaggcgcatcgcctcc
tccacggacgccctgcgtgggggcggcaccggctgggggagcagctgggagggcgggctc
ggaggcgggcggggctcctacggcaccgggggcggtgccgggaaggccgcggggggccgc
cgtcggccctcctacgacgacgacttcgccccgccgatcggctcgggccgcccgaagcgc
acggggcggctcggccgggtcgagacccccaaggaccgcttcgaggcgcggcgggccgag
cgcatggccaagcggggcaggcccacgcggctcgacggctcgagcgccggggccgatggg
gccgacggcggggcgctgcccgccgccgtcgccggtctgaaggtcggggaccgcgtccgc
cacgacgcctacggcgagggggacgtcgtcgccctggagggcgcggggcgctcgaccgtc
gcccgcgtcaccttcaccgtcgacggcgcgaagaacaccaagcgcctcatgctgcgcctg
gcgccgatcgccaggatctga
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