Actinomyces sp. oral taxon 897: C3V41_01985
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Entry
C3V41_01985 CDS
T05399
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acto
Actinomyces sp. oral taxon 897
Pathway
acto03030
DNA replication
acto03430
Mismatch repair
acto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V41_01985
03430 Mismatch repair
C3V41_01985
03440 Homologous recombination
C3V41_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acto03032
]
C3V41_01985
03400 DNA repair and recombination proteins [BR:
acto03400
]
C3V41_01985
Enzymes [BR:
acto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V41_01985
DNA replication proteins [BR:
acto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V41_01985
DNA repair and recombination proteins [BR:
acto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V41_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
AVM61050
LinkDB
All DBs
Position
477666..481253
Genome browser
AA seq
1195 aa
AA seq
DB search
MAETSSTGSQDAPRDDFVHLHVHTDYSMLDGAGKIKDYVAEARRLGQPALAITDHGYMFG
AYEFYAAARAAGIKPIIGVEAYMTPGTSRFDRTRVFWGDESQRGDDVSARGSYTHMTLLS
RTNEGLHNLMRLDSLASLEGQWGKNPRMDRELLSRYSEGLIGTSGCPSSEIQTRLRLGQW
DEALRCAGELQDVFGRDFFYVELMDHGLEIEQRVTKDLLRLAEKIGAPLLATNDSHYVRP
EDRTIQDAMLCINSGSVLSDPDRFKFDGDTYYLRPGAEMRRLFTEMPTACDNTLLVAEQC
DVSFQTVDEGASFMPVFPVPEGETMESWFVSECWSGMERRFGGNIPPECRKQADYEIGVI
TQMGFPGYFLVVADYINWAKRQGIRVGPGRGSGAGSMVAYAMGITELNPLEHGLIFERFL
NPERISMPDIDVDFDERRRDEVIEYVKRKYGEDKVSQVVTYGVIKAKQSLKDSSRVMGYP
YAVGDRLTKAMPPTVQGKDITIKGIFNPSDERYGEAEEFRKLHAEDADAQKIVELAKGLE
GMTRQWGVHACAVIMSSATLTDIIPMMQRVQDGAYITQFDYPTCEHLGLLKMDFLGLRNL
TVISDALENIVANGKPALDIDSVPLDDQGTYELLSRGETLGVFQLDGGGMRTLLRLMRPD
NFEDISAVGALYRPGPMGADSHTNYALRKNGQQEIVPIHPELKEALEPILGTTHGLIVYQ
EQVMKIATDLAGFTMGKADALRKAMGKKKMDILNKMFVEFEAGMVSNGFSKESVKTLWDV
VVPFAKYAFNKAHSAAYGVVSYWTAYLKAHYPTEYMAALLTSQKDNKDKLAVYLGECRHM
GITVLPPDVNASRAQFSAVGDDVRFGLSAIRNVGLNVVDAIVRARQEKGEFTSFEDFLDK
VPAVVCNKRTIDSLIKAGAFDSLGRTRRSLQAVHEDLVDEIIGVKRNEAAGQFDLFASLT
GGEAQDDAFGSGPVFSSEVPDLPEWDKKDKLAFEREMLGLYVSDHPLLGLEGILGKLSDT
EISDLIGDEERSDGAVVTIAGLITSLTRKTTKQGNLWAIAQIEDLGGSLEALFFPATYQT
VSTMLAPDTVVTVRGRLNRRDGQVALYAQEMTIPDVASAANEAVTLTLPSNRCTVPLVER
LREVLTKHPGMSTVRLNLTSPGREIRTQLDDALRVEATAAFYSDIKALLGPGCLR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacaagcagcacgggcagccaggacgcacccagggacgacttcgtccacctc
cacgtccacaccgactactccatgctggacggcgcgggcaagatcaaggactacgtcgcc
gaggccaggcgcctgggccagccggccctggccattaccgaccacggctacatgttcggc
gcctacgagttctacgccgccgccagggccgccggtatcaagccgattatcggggtcgag
gcctatatgaccccgggcacctcccgcttcgatcggacccgcgtcttctggggggacgag
tcccagcgcggcgacgacgtctccgcccgcggctcctacacgcacatgaccctcctgtca
cgcaccaacgagggcctgcacaacctcatgcgcctggactccctggcctccctggagggg
cagtggggcaagaacccgcgcatggaccgcgagctgctctcccgctacagcgaagggctg
atcggcacctccggctgcccctcctcggagatccagacccgcctgcgcctgggccagtgg
gacgaggcgctgcggtgcgccggggagctgcaggacgtcttcgggcgcgacttcttctac
gtcgagctcatggaccacggcctggagatcgagcagagggtcaccaaggacctgctgcgc
ctggccgagaagatcggcgcccccctgctggccaccaacgactcccactacgtgcgcccc
gaggaccgcaccatccaggacgccatgctgtgcattaactccgggtcggtcctgtccgac
ccggaccggttcaagttcgacggcgacacctactacctgcgtcccggggcggagatgcgc
cgcctctttaccgagatgccgaccgcctgcgacaacaccctgctggtcgccgagcagtgc
gacgtgtccttccagaccgtggacgagggcgcctcctttatgcccgtcttccccgtcccc
gagggtgagaccatggagtcctggttcgtctccgagtgctggtcgggaatggagcgccga
ttcggcggcaatatcccccccgagtgccgcaagcaggcggactacgagatcggcgtcatt
acccagatggggttccccggctacttcctggtcgtggcggactacattaactgggccaag
cggcagggaatccgggtcgggccgggacgcggctcgggggcgggctccatggtggcctac
gccatgggtatcaccgagctcaaccccctggagcacgggctcatcttcgagcgcttcctc
aaccccgagcgcatctccatgcccgatatcgacgtcgacttcgacgagcgccggcgtgac
gaggtcattgagtacgtcaagcgcaagtacggcgaggacaaggtcagccaggtcgtcacc
tacggcgtcatcaaggccaagcagtccctgaaggactccagccgggtcatgggctacccc
tacgcggtgggagaccgcctcaccaaggccatgccccccacggtccagggcaaggacatt
accatcaaggggatcttcaacccctccgacgagcgctacggggaggccgaggagttccgt
aagctccacgccgaggacgccgacgcccagaagatcgtggagctggccaaggggctcgag
ggaatgacccggcagtggggcgtgcacgcctgcgccgtcattatgtcctcggccacgctc
accgacattatccccatgatgcagcgcgtccaggacggggcctacatcacccagttcgac
taccccacctgcgagcacctgggcctgctcaagatggacttcctggggctgcgcaacctc
acggtcatctccgacgccctggagaacatcgtggccaacggcaagcccgccctggacatt
gacagcgtgcccctggacgaccagggcacctacgagctgctctcgcgcggcgagaccctg
ggcgtcttccagctcgacggcgggggcatgcgcaccctcctgcgcctcatgcggccggac
aacttcgaggacatctccgccgtcggcgccctgtaccggcccgggcccatgggagcggac
tcccacaccaactacgccctgcgcaagaacggccagcaggagatcgtccccatccacccc
gagctcaaggaggccctggagccgatcctgggtaccacccacggactgatcgtctaccag
gagcaggtcatgaagatcgccacggacttggcggggttcaccatgggcaaggccgacgcc
ctgcgcaaggccatggggaagaagaagatggacatcctgaacaagatgttcgtcgagttc
gaggccggaatggtctccaacggcttctccaaggagagcgtcaagaccctgtgggacgtg
gtggtcccgttcgccaagtacgcgttcaacaaggcgcactcggcggcctacggcgtcgtg
tcctactggaccgcctacctcaaggcgcactaccccaccgagtacatggcggccctgctg
acgtcccagaaggacaacaaggacaagctggccgtctacctgggggagtgccgtcacatg
ggcattaccgtgctgcccccggacgtcaacgcctcccgggcccagttctccgccgtcggg
gacgacgtgcggttcggcctgtcggctatccgcaacgtgggcctcaacgtggtcgacgcc
attgtcagggcccgccaggagaagggcgagttcaccagcttcgaggacttcctggacaag
gtcccggcggtggtgtgcaacaagcgcaccatcgactccctcattaaggccggggcgttc
gactccctgggccgtacgcgccgcagcctgcaggccgtccacgaggacctggttgacgag
atcatcggggtcaagcgcaacgaggccgccggccagttcgacctcttcgcctccctgacg
ggcggtgaggcgcaggacgacgcattcggctccggcccggtcttctcctccgaggtcccc
gacctccccgagtgggacaagaaggacaagctggcctttgagcgcgagatgctgggactg
tacgtctccgaccacccgctcctgggcctggaggggatcctgggcaagctcagcgacacc
gagatctccgacctcatcggggacgaggagcggtctgacggcgccgtggtcaccattgcc
gggctcattacctccctgacccgcaagaccaccaagcagggcaacctgtgggcgatcgcg
cagatcgaggacctgggcgggagcctggaggcgctgttcttccccgccacctaccagacg
gtctccaccatgctggcccctgacacggtggtcaccgtgcgcgggcgcctcaaccggcgc
gacggccaggtggccctgtacgcccaggagatgaccatccccgacgtggccagcgccgcc
aacgaggcggtgaccctcaccctgccgtcgaaccgctgcaccgtcccgctggtggagcgg
ctgcgcgaggtgctcaccaagcacccggggatgtccacggtacgcctcaacctcaccagc
cccgggcgcgagatccgcacccagctcgacgacgccctgcgcgtggaggccaccgcggcc
ttctactccgacataaaggccctgctcggccccggctgcctgcgctga
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