Actinomyces sp. oral taxon 897: C3V41_03965
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Entry
C3V41_03965 CDS
T05399
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acto
Actinomyces sp. oral taxon 897
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acto03016
]
C3V41_03965
Enzymes [BR:
acto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C3V41_03965
Transfer RNA biogenesis [BR:
acto03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C3V41_03965
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AVM61361
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All DBs
Position
979849..981141
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AA seq
430 aa
AA seq
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MSPVPAPAPVPGTTAHPIPVERTRPYLRPAEDLPPVTDSPTALRAACQDLAAGHGPVAVD
AERASGFRYGQDAYLIQLRREGTGTVLVDPLGAGDLHPLAKVLEEPEWILHAADQDLPCL
AERGLAPRRLFDTELAARLLGREHVGLGAVVEETLGLRLAKDHAAADWSIRPLPESWLVY
AALDVELLIPLRQALAQELDSQGKAAWAAQEFEYERTRPARSAKVDPWRKTPKAGRALRN
RRSLAVLREMWTAREALAADLDITPSKVLPHRALVTAAIMRPTSRRKLMTLHDFSSRQAR
LHMETWWQALDRALALPEEELPPLRGPLAPGELTSPRSWARHHTDAARLLDPVRAAVRRR
AEELRVPQELLLAPDTQRRLAWDLGEAVAAGQDVDVRAGAVKKRLAAMDARPWQVEQVGP
TLARTLRRVV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgtcccggcgcccgcaccggtccccgggacgacagcccaccccatccccgtc
gagcgcacccgcccctacctcaggcccgccgaggacctgccaccggtcacggactccccc
acggcgctgcgtgctgcctgccaggacctggccgccggccacggtccggtggccgtggac
gccgagcgggcctcgggcttccgctacggccaggacgcctacctcatccagctgcgccgt
gagggcaccgggacggtcctggtggatcctctcggcgccggggacctgcaccccctggcc
aaggtcctggaggagcctgagtggatcctccacgccgcggaccaggacctgccctgcctg
gccgaacgcggcctggctccgcgccgcctgttcgacaccgagctcgccgcccgcctgctg
ggtcgtgagcacgtcggcctgggggcggtggtcgaggagaccctggggctgcgcctggcc
aaggaccacgccgccgcggactggtcgatccggcccctgccggagtcctggctggtctac
gccgccctggacgtcgagctcctcatccccttgcgccaggccctggcccaggagctcgac
tcccagggcaaggcggcctgggccgcccaggagttcgagtacgagcggacccgtcccgcg
cgctcggccaaggtcgacccctggcgcaagacgcccaaggccgggcgggcgctgcgcaac
cgtcggtccctggccgtcctgcgggagatgtggaccgcccgcgaggctctcgccgccgac
ctggacatcaccccctccaaggtgctgccccaccgggccctggtcaccgccgcgatcatg
cgcccgacctcgcggcgcaagctcatgaccctgcacgacttctcctcccgccaggcacgc
ctgcacatggagacctggtggcaggcgctcgaccgggccctggccctgccggaggaggag
ctgccccccctgcgcgggcccctggcgcccggggagctgaccagcccgcgttcctgggcg
cgccaccacaccgacgccgcccgcctcctggacccggtacgggccgcggtacgccgtcgt
gccgaggagctgcgggtgccccaggagctgctcctggcgcccgacacccagcggcgcctg
gcctgggacctgggtgaggccgtcgccgccggacaggacgtggacgtacgggccggggcc
gtcaagaagcgcctggccgccatggacgcgcgcccctggcaggtcgagcaggtcggcccc
accctggcccgcaccctgcgccgggtcgtctag
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