Actinomyces sp. oral taxon 897: C3V41_04555
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Entry
C3V41_04555 CDS
T05399
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acto
Actinomyces sp. oral taxon 897
Pathway
acto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3V41_04555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acto03019
]
C3V41_04555
03009 Ribosome biogenesis [BR:
acto03009
]
C3V41_04555
Enzymes [BR:
acto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C3V41_04555
Messenger RNA biogenesis [BR:
acto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3V41_04555
Ribosome biogenesis [BR:
acto03009
]
Prokaryotic type
rRNA processing factors
C3V41_04555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
AVM61454
LinkDB
All DBs
Position
complement(1124772..1127693)
Genome browser
AA seq
973 aa
AA seq
DB search
MAPTGQTTTPEEPQETAEQPTARAPRRRRKATAAATAPEPAPQAPAQDLTQGPAGSAQDP
GAPQDPGAAQDADPAPAPEPTASPAGGQTAATREDRAEDYSPREAPGRQPRRRRKATAAA
TAPEPAPQAPDQDLTQGPAGPAQDPGAPQAPDQAGAQVSDQVGAQDVDQDLTQDVDDQDD
QDEAPDQDEGTGPRAADRGPEPGPDQEPEAPGSPTDPDQEPEAVLHLPAASLLFQVPDPS
RARRRRKATAAATAPAPRAAQDPPQEDAQADQDADGGDASGDASGEGTAKGAGSRGRTRR
RRKATAAATAPAPQVGEAPDQAGPAPEEGTASEEADAPEEGAARRRRRRGGRGRRSRGQG
AEAPEQTGQGEPDGEEDAQAVETPEAEPTSSTRRRRRRSRSRSDAREARRDVRDEVTALK
GSTRLEAKRQRRREGRAAGRHRPIVTEAEFLARRESVDRQMIVREVDGLNQIAVLEDGLL
VEHYVARRTQSSMVGNVYVGRVQNVLPSMEAAFVDLGKGRNAVLYAGEVNWDAAGMEGRP
RRIEDALSSGDPVLVQVTKDPIGHKGARLTSQVTLAGRYLVLVPGGTMTGISRKLPDTER
ARLKKILKKVVPDDAGVIVRTAAEGASEEQLGADVERLLKQWRTIDKRSQSIFRGSAKAP
ALLKGEPELALRVVRDVFNEDFRKLIVSGPEAWRTISEYVSDLSPDLVERLEHWVDPEDV
FTAHRIDEQLAKGFDRKVWLPSGGTLVIDRTEAMTVIDVNTGRFTGAGGTLEETVTRNNL
EAAEEIVRQLRLRDIGGMVVIDFVDMVLESNRDLVLRRLVECLGRDRTRHQVTEVTSLGL
VQMTRKRVGQGLVEAFSTPCECCGGRGFIVHDAPVENQQVDMSASASRSAERRGRRSRSE
GPRKTKGAAKAARKAAKEEAPRKDAEDAGDTPGQAEAASAPEHDEARAAVRGALAQIAAA
AEHAHEAKEDPDA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcacccactggacagacgaccacgcccgaggagccccaggagacggccgaacagccc
actgcccgtgccccaaggcgtcggcgcaaggccaccgcggccgccaccgctcccgagccc
gccccccaggcccccgcccaggacctgacccagggccccgctggctccgcccaggacccg
ggtgccccccaggacccgggtgccgcccaggacgccgacccggcaccagcccctgagccg
accgcctccccggccggggggcagacggccgccacccgggaggaccgggccgaggactac
tcgccccgggaggcaccgggccgccagccccgccgtcggcgcaaggccaccgcggccgcc
accgcccccgagcccgccccccaggcccccgaccaggacctgacccagggccccgccggc
cccgcccaggacccgggtgccccccaggcccccgaccaggccggtgcccaggtcagcgac
caggtcggtgcccaggatgtggaccaggacctcacccaggacgtggacgaccaggacgac
caggacgaggcccctgaccaggacgagggaaccggtccccgggcagcggaccggggcccc
gagcccggccccgaccaggagcccgaggcgcctggttcccccacggatccggaccaggag
cccgaggccgtcctgcacctgccagcggcctccctgctcttccaggtccccgacccctcc
cgggcccgtcgtcggcgcaaggccaccgcggccgccaccgcgccagccccccgggccgcg
caggaccctccccaggaggacgcccaggctgaccaggacgctgacggcggggacgccagc
ggggacgccagcggcgagggcaccgccaagggcgcagggtcccgtggccgcacgcgccgc
cgtcgtaaggccaccgcggccgccaccgcgccggccccccaggtcggtgaggcccccgac
caggccggccccgccccggaggaggggaccgcctcggaggaggccgacgccccggaggag
ggggccgcccggcgcaggcgccgccgcggcggacggggtcggcgctcccgggggcagggc
gccgaggcccccgagcagaccggtcagggcgagccggacggcgaggaggacgcccaggcg
gtcgagacgcccgaggccgagccgacctcgtccacacgtcggcggcgacggcgctcccgg
tcccgttccgacgcccgggaggcgcgtcgggacgtgcgtgacgaggtgaccgccctgaag
ggatccacccgcctggaggccaagcgccagcgccgccgggaggggcgggccgcgggacgg
caccggcccatcgtcaccgaggccgagttcctggcccggcgcgagtccgtggaccggcag
atgatcgtccgggaggtcgacggcctcaaccagatcgccgtgctggaggacggcctcctg
gtggagcactacgtggcgcggcgcacccagtcctccatggtgggcaacgtctacgtcggg
cgggtccagaacgtcctgccctccatggaggccgccttcgtggacctgggcaaggggcgc
aacgccgtcctgtacgccggcgaggtcaactgggacgccgccggcatggagggcaggccg
cgccgtatcgaggacgccctctccagcggcgaccccgtcctggtgcaggtcaccaaggac
ccgatcgggcacaagggcgcccgcctgaccagccaggtcaccctggcgggccgctacctg
gtgctggtgcccgggggcaccatgaccggcatctcccgcaagctccccgacaccgagagg
gcgcgcctgaagaagatcctcaagaaggtcgtccccgacgacgccggcgtcattgtgcgc
accgccgccgagggcgccagcgaggagcagctgggggccgacgtcgagcggctcctcaag
cagtggaggaccattgacaagaggtcccagtccatcttcaggggctccgccaaggcgccg
gccctcctcaagggcgagcccgagctggccctgcgcgtggtgcgtgacgtcttcaacgag
gacttccgcaagctcatcgtctccggcccggaggcctggcgcaccattagcgagtacgtc
tccgacctcagcccggacctggtggagcgtctcgagcactgggtggatcccgaggacgtc
ttcaccgcccaccgcattgacgagcagctcgccaagggcttcgaccgcaaggtgtggctg
cccagcggcgggaccctggtcattgaccgcaccgaggccatgacggtcatcgacgtcaac
accggccgcttcacgggggccgggggcaccctggaggagaccgtcacccgcaacaacctg
gaggccgccgaggagatcgtgcgccagctgaggctgcgcgacatcggcggcatggtggtc
atcgacttcgtggacatggtcctggagtccaaccgggacctggtcctgcgccggctggtg
gagtgcctgggccgggaccgcacccgccaccaggtcaccgaggtcacgtccctgggcctg
gtccagatgacccgcaagcgggtgggtcaggggctcgtggaggccttctccaccccgtgc
gagtgctgcggcggccggggctttatcgtccacgacgccccggtggagaaccagcaggtg
gacatgtccgcctcggcctcgcgctccgccgagcggcgcggccgccggtcccgctccgag
ggccccaggaagaccaagggcgccgccaaggcggccaggaaggccgccaaggaggaggcc
cccaggaaggatgccgaggacgccggtgacacgccggggcaggcggaggccgcgtcggcc
cccgagcacgacgaggcccgtgccgccgtgcgtggcgccctggcccagatcgccgccgcc
gctgagcacgcccacgaggccaaggaggacccggacgcctga
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