Actinomyces sp. oral taxon 897: C3V41_07095
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Entry
C3V41_07095 CDS
T05399
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acto
Actinomyces sp. oral taxon 897
Pathway
acto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3V41_07095 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acto03021
]
C3V41_07095 (rpoC)
03400 DNA repair and recombination proteins [BR:
acto03400
]
C3V41_07095 (rpoC)
Enzymes [BR:
acto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3V41_07095 (rpoC)
Transcription machinery [BR:
acto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3V41_07095 (rpoC)
DNA repair and recombination proteins [BR:
acto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3V41_07095 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AVM61859
LinkDB
All DBs
Position
complement(1748801..1752820)
Genome browser
AA seq
1339 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIRSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRAELEVKKKHVQEAGEADVEARQRRLEED
LAASEAEGADTAHRDKLRKTAEREIGALRRKNARVLEHMDRVWDRFVSLKVGDLEGDEVL
YRDMKADYGIYFEGAMGAEAIQARLRAFDLDKEAESLAEIVASGTGQRKTRAIKRLKVIN
AFRLTGTAPESMVLDSIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMEL
EAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLALHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTQTPDPDLEVDR
DSHGQEVVPAFSSFAEAVMAHDFGRLDVNATCDIRFEEGITAPDGWVPPASWHEGDPITL
RTSLGRAIFNTALPETFPYVNYVVDKKALGNIVNTLAESYSRVEVAASLDALKANGFYWS
TWSGITVAFADVVSPASKPEILARYEAQAAKIEEQFVDGFLTKKDRHTALINIWTDATAE
VAQAMRDNFPARNTVYQMVVSGARGNWDQIRQLAGMRGLVADPKQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTRKGLTKRIFSW
RKMHEPSEEEAARGVEAYPVPADPQDEGAFKHPSEILGTTVFGTTLARNAVDAAGNVVIP
AGTDLGDEEIRAAIDAGIEEIAVRSVLTCDSTVGTCAACYGRSLATGKRVDIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGAAGAADITQGLPRVQELFEARTPKGEAAVAEVAGTLAIED
DDEGKRLVIKREDGEEDVVIPVSRRQRLLVIGGVHVEPGQALTEGPVDPKKILRLRSVGD
TQRHLVNEVQEVYRSQGVDIHSKHIEVIVRQMMRRVTVLDPGDTDLLQGDLVDVMTYRAE
NRRVMAEGGKTASGRTELMGITKASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLK
ENVILGKLIPAGTGLARYSDIEVEPTEEVKTALLTRVVTSQEMFTGDGVPLDDVPYEGEF
RTEFPNEFHADFSEEDHRV
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacgtcttcgatcgcatccagctcggcctggccaccgcggaggacatc
aggtcctggtcgcacggcgaggtcaagaagcccgagaccattaactaccgcaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
gcctgcgggaagtacaagcgggtgcgctacaagggcattgtctgcgagcggtgcggcgtg
gaggtcacccgctccaaggtgcgtcgtgagcgcatggcccacattaagctggccgccccg
gtgacccacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctcaacctg
gcgcccaaggacctggagaaggtcatctacttcgccgcctacatggtcaccgaggtggac
gaggagggccgtcacgacgacctgccgagcctgcgcgccgagctggaggtcaagaagaag
cacgtccaggaggccggtgaggccgacgtcgaggcccgccagcgccgcctggaggaggac
ctggccgcctccgaggccgagggggccgacaccgcccaccgcgacaagctccgcaagacc
gccgagcgtgagatcggggccctgcgtcgtaagaatgcccgggtcctggagcacatggac
cgggtgtgggaccgcttcgtgagcctcaaggtcggtgacctggagggcgacgaggtgctc
taccgggacatgaaggccgactacggcatctacttcgagggcgccatgggggccgaggcc
atccaggcccgcctgcgcgccttcgacctggacaaggaggccgagtccctggccgagatc
gtggcgagcggcaccggccagcgcaagacccgggccattaagcgcctgaaggttattaac
gccttccgcctgaccggcaccgccccggagtccatggtcctggactccatcccggtcatc
cccccggacctgcgtcccatggtccagctcgacggcggccgcttcgccacgtccgacctc
aacgacctctaccgtcgtgtcattaaccgcaacaatcgtctcaagcgcctcatggagctg
gaggccccgacgattattgtcaacaatgagaagcgcatgctccaggacgccgtggacgcc
ctgttcgacaacggccggcgcggccggcccgtgaccggggtgggcaaccgccccctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgggtggactactcgggccgaagcgtcatcgtggtgggcccccagctggctttgcaccag
tgcggcctgcccagccagatggccctggagctgttcaagccctttgtcatgaagcggctg
gtggagctcaaggaggcccagaacgtcaaggccgccaagcgcatggtggagcgggccaac
cccaaggtctgggacgtcctggccgaggtcatccgcgagcacccggtgctgctcaaccgc
gcccccaccctgcaccgcctgggcatccaggcctttgagccccagctcatcgagggcaag
gccatccagctccaccccctggtgtgcggcgccttcaacgccgacttcgacggcgaccag
atggccgtgcacctgcccctgggcgccgaggcgcaggccgaggcccgcatcctcatgctg
tcgagcaacaacatcctcaagccctccgacgggcggcccgtgaccatgcccagccaggac
atgatcatcggcacctactacctcacccagacgccggaccccgacctggaggtggacagg
gactcccacggccaggaggtggtgcccgccttctcctccttcgccgaggccgtcatggcc
cacgacttcggccgcctcgacgtcaacgccacctgcgacatccgcttcgaggagggcatt
accgcccccgacggctgggtgccccccgccagctggcacgagggcgacccgatcaccctg
cgcacctcgctgggacgggccatcttcaacacagcgctgcccgagaccttcccctacgtc
aactacgtggtggacaagaaggccctgggcaatatcgtcaacacgctggcggagtcctac
tcccgcgtggaggtggcggcctccctggacgccctcaaggccaacggcttctactggtcc
acctggtcgggtatcaccgtggccttcgccgacgtcgtctccccggcctccaagcccgag
atcctcgcccgctacgaggcccaggcggccaagatcgaggagcagttcgtcgacggcttc
ctgaccaagaaggaccgccacaccgcgctgatcaacatctggaccgatgctaccgccgag
gtcgcccaggccatgcgggacaacttcccggcccgtaacaccgtctaccagatggtggtc
tccggggcccgcggcaactgggaccagatccgccagctggcgggcatgcgcggcctggtg
gccgaccccaagcagcgcctcattgagcgcccgatcaagtccaactaccgcgagggcctg
agcgtcctggagtacttcatcgccacccacggggcccgcaagggcctggcggacacggcg
ctgcgcaccgccgactccgggtacctgacccgccgcctggtggacgtctcccaggacgtc
attgtgcgcgaggaggactgcggcacccgcaagggcctgaccaagcgcatcttctcctgg
cggaagatgcacgagccctccgaggaggaggcggcccggggcgtcgaggcctacccggtc
ccggccgatccgcaggacgagggcgccttcaagcaccccagcgagatcctgggcaccacg
gtgttcggcaccacgctggcccgcaacgccgtggacgccgcgggcaacgtggtcatcccc
gccggcaccgacctgggcgacgaggagatccgggccgccatcgacgccggtatcgaggag
atcgccgtgcgctcggtgctgacctgcgactccaccgtgggcacctgcgccgcctgctac
ggccgctccctggccaccggcaagcgggtggacatcggcgaggccgtgggcattatcgcc
gcccagtccattggcgagccgggcacgcagctgaccatgcgcaccttccacaccggtggt
gcggccggcgccgccgacatcacccagggtctgccccgcgtccaggagctcttcgaggcc
cgcacccccaagggcgaggctgccgtggccgaggtcgccggcaccctggccattgaggac
gacgacgagggcaagcgcctggtcattaagcgtgaggacggcgaggaggacgtggtcatc
cccgtctcgcgccgccagcgcctgctggtgatcggcggcgtccacgtcgagcccgggcag
gccctcaccgaggggccggtggaccccaagaagatcctgcgcctgcggtccgtgggcgac
acccagcgccacctcgtcaacgaggtccaggaggtctaccgctcccagggcgtggacatc
cactccaagcacattgaggtcattgtgcgccagatgatgcgccgcgtgaccgtgttggac
cccggtgacaccgacctcctccagggcgacctggtggacgtcatgacctaccgggccgag
aaccgccgggtcatggccgagggcggcaagacggcgtcggggcgcaccgagctcatgggg
atcaccaaggcctccctggccacggactcctggctgagcgcggcctccttccaggagacc
acgcgggtgctcaccgaggccgctatgaacggcaagtccgacccgctgctgggcctgaag
gagaacgtcatcctgggcaagctcatccccgccgggacgggcctggcccgctactccgac
atcgaggtggagcccaccgaggaggtcaagacggcgctcctcacccgcgtggtgacctcc
caggagatgttcaccggcgatggggtgcccctggacgacgtgccctacgagggggagttc
cggacggagttccccaacgagttccacgccgacttctccgaggaggaccaccgggtctga
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