Actinomyces sp. oral taxon 897: C3V41_10920 Help Entry C3V41_10920       CDS       T05399                                  Name (GenBank) ATP-dependent helicase   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism acto  Actinomyces sp. oral taxon 897 Brite KEGG Orthology (KO) [BR:acto00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acto03019]     C3V41_10920 Enzymes [BR:acto01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      C3V41_10920 Messenger RNA biogenesis [BR:acto03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      C3V41_10920 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind HA2_C Helicase_C DEAD AAA_19 AAA_22 HA2_N nSTAND3 T2SSE NACHT TsaE NTPase_1 Motif Other DBs NCBI-ProteinID:  AVM63000 LinkDB All DBs Position complement(2773245..2778248) Genome browser AA seq 1667 aa AA seqDB search MAARAAAVPALTYPAELPVSARREDIAAAVRDHQVVIVAGETGSGKTTQIPKICLELGRG VTGMIGHTQPRRIAARSVAERIAHELGTPIGREGVVGYQVRFTDEVGPTTLVKLMTDGIL LAEIQTDPMLRRYDTIIVDEAHERSLNIDFILGYLARLLPSRPDLKVIITSATIDSARFA EHFGHRGVGGDGEPLTAPAPVIEVSGRTYPVEIRYRPLTPEAEDDGAPTDGAPPQGAEGS REEAGGAAAPTGTATGTGSTGTAPGSPAPGPPAAPGELTDAELEALTSPDPAVRSAARAR RQAARSAVRSAPSPRGGGARGRGQAGGQAGAGGRTGAGDPGEPRDQVTGILDAVDELMGT GSGDILVFLAGERDIRDTEAALVDHLGPRYTADGRARTPGAVEVVPLYSRLSAAEQHRVF EAHSCRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPVSRASADQR AGRCGRVADGVAIRLYSRSDFDSRPQYTEPEILRTSLASVILQMAALGLGAVEDFPFLDA PDPRQVRSGVQLLTEIGAIEAEGRDARHHGTGPRDEATGDHGTSHNTGHSASHGTGRGAT PRRGPRLTPVGRRLARLPIDPRLGRMLLEAGERGCAGEVLVVVAALSIQDVRERPADRQE ASDALHRRFADPTSDFLTYLNLWRYLRTQARELSGSAFRRMCRTEFIHYLRVREWFDVHA QLRQMARPLGLDAAPVELPTARAIRAAGDALEAGTQAATIAHGDVAAAVVALGRSADTPD ADAIHRSLLVGLLSNVGSWDERRREYAGARGTRFTIWPGSGLRRKTYDWVMTAELVETSR LFARTVAKVDARWVEEAAGAAGLLRRVYGEPYWSTRHGAAMVHEKVLLYGMTLVADRPAT LASVGTQAAREVAREMFIRSGLVEGGWHARHAFVERNRELVEELGDVEQRRRVHGLLADD EVLVRFYEDRLPEDVYGAADFDAWWKRERRRRPDLLDFTRDLLLPGGDDASGYPDTWVQG DLTLGLDYVFEPGRGDDGVSVQVPVEVLGRLEPEGFDWLVAGMRPELCVATIRALPKRVR RQLVPAPDVGAQVWTEIRAQVPGADGAGDVSAPPLPFRQAFTAAVARLRDVEVGDADWEA VEENLPDHLRMGFVGLGPEGQVLARGRDLVALQRRLAERTEAAVRSVVRGALAQVMAEAR ERDSSRQAGQGREGRAARGEGVRAARPGGSAGAGATGAGRGGHGAGRPGQVGPGDVPGAG RGAGAGLRTGLAERAGLTNWPTGVPGLEGPQASTIPATVESTGAAGLVVRGYPTLVACGG AARLRPDAQERPAGIPGPDAGSTGGPGPGKEPGPGKGSGPQSPKKGSGPGRGPGPGKGAG KNPGPGKTVGATGSAPGSRTGQAPLGADLTILPDAGSQEREHGAGVTALALARTVLPPGR VSSRWSGDEALVLAASPYRSTPELVADLQLAAARSVASRWADQASRPLAQVREQAVFEDL VAWVRQHLEDEVYRLAVMVVRTLQAVRRVEQAVGEHTSLTLLATLQEVREHVAELVYPGF VVSTPTEELAHLPRFLSALAVRVERAASSPGAAAQDAALSYQVGQAVDLVEAARARASAL PPDAHRREVLEEARWMVEELRVSLFAQTLGTSRKVSLQRISRLLASI NT seq 5004 nt NT seq  +upstreamnt  +downstreamnt ctggccgcgcgcgccgcggccgtccccgccctgacctaccccgccgagctgccggtcagt gcccggcgtgaggacattgcggcggccgtgcgggaccaccaggtggtcatcgtggccggg gagaccgggtcgggcaagaccacccagatccccaagatctgcctggagctgggccgcggc gtcacggggatgatcggtcacacccagccgcggcgtatcgccgccagaagcgtggccgag cgcatcgcccacgagttgggcacgccgatcggccgtgagggggtggtgggctaccaggtt cgcttcaccgacgaggtcggccccaccaccctggtcaagctcatgaccgacggcatcctg ctggccgagatccagaccgaccccatgctgcgccgctacgacacgatcattgtggacgag gcccacgagcgcagcctcaatatcgacttcatcctgggctacctggcccgcctgctgccg agccgcccggacctgaaggtcattatcacctccgccaccattgactcggcgcgcttcgcc gagcacttcgggcaccgcggggtaggcggggacggcgagcccctcaccgcgccagccccc gtcattgaggtctcggggcgcacctaccccgtggagatccgctaccggccccttaccccg gaggccgaggacgacggcgcccccaccgacggcgcgccccctcagggtgccgagggctcc cgggaggaggcgggcggggcagcggccccgacaggcacagccacaggcacaggctcgaca ggcacggccccgggctcccccgcccccggcccaccggccgcccccggggagctgaccgac gccgagctggaggccctgacctcacccgacccggccgtccgctccgccgcccgggcccgg cgccaggccgcacgctccgccgtccgctccgccccctccccgcggggagggggagcccgc ggcagggggcaggccgggggccaggcgggcgccggggggcggacaggcgccggtgaccct ggtgagccccgcgaccaggtcaccgggattctcgacgccgtcgacgagctcatggggacg ggtagcggcgacatcctcgtcttcctggccggtgagcgggacatccgtgacaccgaggcg gccctggtcgaccacctgggcccccgctacaccgctgacgggcgcgcccgcacccccggg gcggtggaggtcgtccccctgtactcgcgcctgagcgctgctgagcagcaccgggtcttc gaggcgcactcgtgccgccgcatcgtcctggccaccaacgtggccgagacctccctgacg gtcccgggcatccgctacgtcatcgacccgggcctggcgcgtatctcccgatactccaac cgcaccaaggtccagcgcctgcccattgagccggtcagccgggccagcgccgaccagagg gcgggccgctgcgggcgcgtggccgacggcgtcgccatccgcctgtactcccgctccgac ttcgactcccgcccgcagtacaccgagccggagatcctgcgcacctccctggcgtccgtc atcctgcagatggcggccctgggcctgggggcggtggaggacttccccttcctggacgcc cccgacccccgccaggtgcgcagcggcgtccagctgctcaccgagatcggggccattgag gccgagggccgcgacgcccggcaccacggcaccggcccacgggacgaggccaccggggac cacggcaccagccacaataccggtcacagtgccagccacggcaccggccgtggcgccacc ccgcggcggggcccgcgcctgacgccggtcggccgacgcctggcgcgtctgcccattgac ccgcgcctggggcgcatgctgctggaggccggggagcgcggctgcgccggggaggtcctg gtggtggtggcggccctgtccatccaggacgtgcgcgagcggcccgcggacaggcaggag gcctccgacgccctgcaccggcgcttcgccgaccccaccagcgacttcctgacctacctc aacctgtggcgctacctgcgcacccaggcccgggagctgtccggaagcgccttccggcgc atgtgccgcaccgagttcatccactacctgcgggtgcgtgagtggtttgacgtccacgcc cagctgcggcagatggcccgccccctgggcctggacgcggcccccgtggagctgcccacc gcccgcgccatccgggccgccggcgacgccctggaggcgggcacccaggcggccaccatc gcccacggggacgtggccgcggctgtcgtggccctgggccgcagcgcggacacccccgac gccgacgccatccaccgctccctgctggtggggctgctgtccaacgtgggcagctgggac gagcggcggcgcgagtacgcgggggcgcgcggcacccgctttaccatctggcccggctcg gggctgcgtcgcaagacctacgactgggtcatgaccgccgagctggtggagacgagccgg ctgttcgcccgcaccgtggccaaggtggacgcccgctgggtggaggaggcggccggggcg gccgggctgctcaggcgcgtctacggcgagccgtactggtccacccgccacggggcggcc atggtccacgagaaggtcctcctgtacggcatgaccctggtggccgaccgccccgccacc ctggcgagcgtgggcacgcaggcggcccgcgaggtggcccgggagatgttcatccgctcc ggcctggtcgagggcggctggcacgcccgccacgccttcgtggagcgcaaccgggagctg gtcgaggagctgggggacgtggagcagcggcgtcgggtccacgggctgctggccgacgac gaggtcctggtccgcttctacgaggaccgcctgcccgaggacgtgtacggggccgccgac tttgacgcctggtggaagcgggagcggcggcgtcgccccgacctgctggacttcacccgc gacctgctgctgcccggcggggacgatgccagcggctaccccgacacctgggtgcagggg gacctgaccctggggctggactacgtcttcgagcccggccgcggcgacgacggcgtgagc gtgcaggtgccggtggaggtgctgggacggctggagcctgaggggttcgactggctggtg gcgggcatgcgccccgagctgtgcgtggccaccatccgggccctgcccaagcgggtgcgc cgccagctggtgcccgccccggacgtgggcgcccaggtgtggacggagatacgcgcgcag gtcccgggggccgacggcgccggggacgtcagtgccccgccgctgcccttccgtcaggcc ttcaccgcggccgtggcgcggctgcgcgacgtggaggtcggtgacgccgactgggaggcg gtggaggagaacctgcccgaccacctgcgcatgggcttcgtgggcctgggacccgagggg caggtgctggcccgtggcagggacctggtggccctccagaggcggctggcggagcgtacc gaggccgccgtgcgctcggtggtacgcggggccctggcccaggtcatggccgaggcccgt gagcgcgactcctcccgccaggccggacagggccgggaggggcgtgcggcccggggtgag ggcgtccgggccgcacgccccggtgggtcggccggggccggggccaccggggcgggccgg ggcgggcacggggccgggcggccggggcaggtgggccccggggatgtccccggtgcgggg cggggcgcgggagccggcctgcgcacgggcctggccgagcgcgcggggctgaccaactgg cccaccggggtaccggggctggagggcccgcaggcctccaccatcccggccaccgtggag tccacgggggcggcgggcctggtggtgcgcggctaccccacgctggtggcctgcggcggg gcggctcgtctgcgccccgacgcccaggagcgtcccgccggcatcccgggaccggacgcg ggctccacgggcggacccggcccggggaaggagcccggccccgggaaggggtccggcccc cagagccccaagaagggatccgggcccgggagaggcccagggcccgggaaaggagctggg aagaacccggggcccgggaagacggtgggcgccactgggtcggcaccgggtagccgtacc gggcaggcgcccctgggtgcggacctgaccatcctgcccgacgccgggtcccaggagcgg gagcacggggcgggggtgacggccctggcactggcgcgcacggtcctgccgcccgggcgg gtgagcagccggtggagcggggacgaggccctggtcctggccgcctccccgtaccgcagc accccggagctggtggccgacctccagctcgcggcggcccgcagcgtagcctcccggtgg gccgaccaggccagccgccccctggcgcaggtgcgcgagcaggcggtcttcgaggacctc gtggcctgggtacgtcagcacctggaggacgaggtctaccggctcgcggtcatggtggtg cgcaccctccaggcggtgcgccgggtggagcaggcggtgggggagcacacctccctgacc ctgctcgccaccctccaggaggtgcgcgagcacgtggccgagctagtgtacccggggttc gtggtctccacgcccaccgaggagctggcgcacctgccgcggttcctgtccgccctggcc gtgcgggtggaacgggcggcctcctccccgggcgccgccgcccaggacgcggccctgtcc taccaggtgggccaggccgtggacctggtggaggccgcccgggcgcgggcgtccgcgctg cccccggacgcccaccgccgggaggtgctggaggaggcccggtggatggtcgaggagctg cgggtgagcctgttcgcccagaccctggggaccagccgcaaggtcagcctccagcggatc tcccggctcctggcgagcatctga

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