KEGG   Actinomyces sp. oral taxon 897: C3V41_12400
Entry
C3V41_12400       CDS       T05399                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
acto  Actinomyces sp. oral taxon 897
Pathway
acto02024  Quorum sensing
acto03060  Protein export
acto03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:acto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C3V41_12400
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C3V41_12400
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C3V41_12400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:acto02044]
    C3V41_12400
Enzymes [BR:acto01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C3V41_12400
Secretion system [BR:acto02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C3V41_12400
  Eukaryotic Sec-SRP protein
   C3V41_12400
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA ArsA_ATPase AAA_31 APS_kinase MeaB AAA_22 VirC1 AAA_30 Zeta_toxin nSTAND3 MobB cobW AAA_24 AAA_33 AAA_18 AAA_16 Thymidylate_kin NPHP3_N CBP_BcsQ 6PF2K TsaE
Other DBs
NCBI-ProteinID: AVM62684
LinkDB
Position
3157609..3159252
AA seq 547 aa
MFGNLSDRLTASFNSLRGKGRLTEADIDATVTEIRRALLEADVALPVVRSFTAAVREKAK
DVARSQALNPAQQVVKIVNDELVEVLGGDSREINWAPHGPTVIMLAGLQGAGKTTLAGKL
GRWLRDQGKRVLLVASDLQRPNAVTQLSVVAGRAGVQVWAPEPGNGVGDPVAVARSGVEH
ARASGYDVVVVDTAGRLGVDAEMMDQAVRIRDAVSPHEILFVLDAMVGQDAVNTSVAFRD
GVGFTGVVLSKLDGDARGGAALSVRGVTGAPVLFSSTGEGLGDFERFHPDRMASRILDMG
DLLTLIEQAERTMNQKEAEDAAAKLAQGTFTLDDFLSQLRQIRKLGSMKKLLGMMPGMGQ
MREALEAFDEREVDRIEAIVCSMTPAERADLSILNGSRRSRIAKGSGTTVQAVNNLVERF
VAAKKMMEAMAAGGGGLGAGMPGMGSLPGAGRRAGARQAPKAKRGKGGKKGRSGNPAKAA
RQAQEAARRRSAGGDDAPAPAQGASFGLGGGASAGGYGIMPSTERTPAQEADPRAALPED
LRRRLGL
NT seq 1644 nt   +upstreamnt  +downstreamnt
gtgttcggcaacctctccgatcggctcaccgcctccttcaactccctgcgtggcaagggc
aggctcacggaggcggacattgacgccaccgtcaccgagatccgccgcgccctgctggag
gccgacgtcgccctgccggtggtgcgctccttcaccgcggccgtgcgcgagaaggccaag
gacgtggcccgctcccaggccctcaacccggcccagcaggtcgtgaagatcgtcaacgac
gagctcgtcgaggtcctgggcggggactcccgcgagatcaactgggccccccacggcccc
accgtcattatgctcgccggcctccagggtgccggcaagaccaccctggccggcaagctg
gggcgctggctgcgcgaccagggcaagcgcgtcctgctggtggcctccgacctccagcgt
cccaacgccgtcacccagctgagcgtggtggccgggcgcgccggggtgcaggtgtgggcg
cccgagcccggcaacggcgtgggcgacccggtcgccgtggcccgctccggcgtcgagcac
gcccgggccagcggctacgacgtggtcgtggtggacaccgccgggcgcctgggcgtggac
gccgagatgatggaccaggccgtccgcatccgcgacgccgtgtccccccacgagatcctt
ttcgtcctggacgccatggtcggccaggacgccgtcaacacctcggtggccttccgcgac
ggcgtgggcttcaccggcgtggtcctctccaagctcgacggcgacgcccggggcggtgcg
gccctgtcggtgcgcggggtcaccggcgccccggtcctgttctcctccaccggcgagggc
ctgggtgacttcgagcgtttccaccccgaccgcatggccagccgcatcctggacatgggg
gacctgctgaccctcattgagcaggccgagcggaccatgaaccagaaggaggccgaggac
gccgccgccaagctcgcccagggcaccttcaccctggacgacttcctgagccagctgcgc
cagatccgcaagctgggctccatgaagaagctcctgggcatgatgcccggcatgggtcag
atgcgtgaggcgctggaggcctttgacgagcgcgaggtggatcgtattgaggcgatcgtg
tgctcaatgacccccgccgagcgggccgacctgtccattctcaacggctcgcgccgcagc
cgtatcgccaagggctcggggaccaccgtgcaggccgtcaacaacctggtggagcggttc
gtggccgccaagaagatgatggaggccatggccgcgggcggcgggggcctgggggcgggc
atgcccgggatgggctccctgcccggtgccggcaggcgcgccggggcccgccaggccccc
aaggccaagcggggcaagggcggtaagaagggacgcagcggcaaccccgccaaggccgcc
cgccaggcccaggaggcggcacgcaggcgatcggccgggggcgacgacgcaccggcccct
gcccagggggcctccttcgggctggggggcggcgcctccgccggaggctacgggattatg
cccagcaccgagcgcaccccggcccaggaggccgaccccagggccgccctccctgaggac
ctgcgccgtcgcctcgggctgtag

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