Actinomyces gaoshouyii: B6G06_04025
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Entry
B6G06_04025 CDS
T04911
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
actp
Actinomyces gaoshouyii
Brite
KEGG Orthology (KO) [BR:
actp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actp03016
]
B6G06_04025
Enzymes [BR:
actp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B6G06_04025
Transfer RNA biogenesis [BR:
actp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B6G06_04025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARD42726
LinkDB
All DBs
Position
complement(982955..984121)
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AA seq
388 aa
AA seq
DB search
MARAASAIEDGTGPVAVDAERASGFRYGQDAYLIQLRRAGAGTILIDPVSAGPLDALAAA
LDGPEWILHAADQDLPCLADVGLAPREVFDTELAARLLGREHVGLGAVIEETLGLRLAKD
HAAADWSTRPLPDSWLVYAALDVEFLTELRDALTSELADEGKLEWAMQEFEAVRTRGPRA
PKVDPWRKTPRAGTAVRSQRSLAVLREVWTAREDLAVELDRTPSRVLPHRAVVSAAIACP
TSRRKLFALKDFSSRQARQHSEVWWRAVERALSLPDDELPPLRAPLAPGDLPQPRSWARH
HPEAAQLLDIVRSCVRAHGERIRVPQELLLAPESQRRLAWDLGHEMARGGHPAIDPDAVS
ARLEDLDARPWQIEQCADPLSRALRRAV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ctggcgcgggcggcctcggcgatcgaagatggcaccggccccgtcgccgtcgacgccgag
cgggcatcgggcttccgttacggccaggacgcctacctcatccagctccggcgcgccggt
gctgggaccatcctgatcgatccggtctcggccgggcccctcgatgccctcgccgcagcg
ctggacgggcccgagtggatcctgcacgcggccgaccaggaccttccctgcctggcggat
gtcggcctggccccgcgggaggtcttcgacaccgagctcgcggcccgtctgctcggccgc
gagcatgtgggcctcggcgcggtcatcgaggagacgctcggcctacggctggccaaggac
cacgcggccgccgactggtccacccgccccctgccggattcctggctcgtctacgccgct
ctcgacgtcgagttcctcaccgagctgagggacgccctgacctcggagctcgccgatgag
gggaagctcgagtgggcgatgcaggagttcgaggcggtgcgcactcggggcccgagagcc
ccgaaggtcgatccctggcgcaagacgccacgcgcgggcactgccgtgcgctcccagcgc
tcgctagcggtgctgcgggaggtgtggaccgcccgggaggatctcgccgtcgagctcgac
cggacgccgtcgagggtccttccccaccgcgccgtcgtgtccgcggcgatcgcctgcccg
acctcccgccgcaagctcttcgctctcaaggacttctcctcgcgccaagcgcgccagcat
tccgaggtgtggtggcgggcggtggagcgggccctcagccttcccgacgacgagcttccg
ccgctgcgcgccccactcgcacccggcgatcttccccagccccgatcctgggcgcgtcac
caccccgaggccgcgcagctcctcgacatcgtccgctcctgcgtgcgtgcgcatggcgag
aggatccgtgtgccccaagagctgctcctcgcccccgagtctcagcgccggctcgcctgg
gacctcggtcatgagatggcccggggcgggcaccccgcaatcgacccggatgcggtctcg
gcccggctggaggacctcgatgccaggccctggcagatcgagcaatgcgccgatcccctg
tcccgagcgctgcgccgggccgtctag
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