Actinomyces gaoshouyii: B6G06_04195
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Entry
B6G06_04195 CDS
T04911
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
actp
Actinomyces gaoshouyii
Pathway
actp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B6G06_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actp03019
]
B6G06_04195
03009 Ribosome biogenesis [BR:
actp03009
]
B6G06_04195
Enzymes [BR:
actp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B6G06_04195
Messenger RNA biogenesis [BR:
actp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B6G06_04195
Ribosome biogenesis [BR:
actp03009
]
Prokaryotic type
rRNA helicases
B6G06_04195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
ARD41642
LinkDB
All DBs
Position
complement(1023738..1026197)
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AA seq
819 aa
AA seq
DB search
MTTQNPSASDEHGPLGLDALFSTSEEGIASPTAARTGAIGTAISAVSADSSASAPSFDTP
ASSDTPEDPEDVEHEDEEDDVDRALPESDPEDDAPDEAENADDGADIDEEDVDGHAPFDP
SDDDDEPEDSARDAGDAPAEVTFSDLGLPADLLKAVTDMGYTTPTPIQREAIPVLLDGRD
VVGVAQTGTGKTAAFGLPLLDAVDARDGEVQALVLAPTRELALQSADAITEMASRSRGLD
VVAVYGGAPYGPQIGALKSGAQVVVGTPGRIIDLIDKGALVLDAVKYFVLDEADEMLRMG
FAEDVETIAASLPSERRTALFSATMPPAIERVAAEHLVDPARIEVSRQSSTVDTVHQTYA
VVPFRHKIGAVSRVLAVTEAEAAIVFVRTKSTAEDVAIELAGRGIQAAAISGDVPQRERE
RLVERLRAGTLDVLVATDVAARGLDVDRIGLVVNFDVPREAEAYVHRIGRTGRAGRHGEA
VTFLTPKEKSKLRQIERLTGTRLEEITLPSPADVSAHRAHKLLAKAAARHERGRLSMYTP
LIAELDIDAEELAATLLALAVGDEGPQRRHDDDRPRRGRERREVSVDDEGAFVSASFEGG
RESRRRERPEGKPGASRGGRREHEGPGTVYRIEVGHRDRVMPGAIVGALANEGGISGSDI
GKIDILQSFSLVTIHAPLSEDQLEAMRHATFSGRELRIRPDEGPGHGWSGPDDRGFRGDR
GDRGFRGDRGFRGDRGDRGYRDRDERGGRDGGYRGRPDRRGGYRDDRGGRRWEDRGGRDS
GFRDDRGYRSGRDERGGNRGGYRGNRDNRGSWGSRRADS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcagaacccgtccgcctccgacgagcacgggcctctcggcctcgatgctctc
ttcagcacctccgaggaggggatcgcctcgcccaccgcggcgcgcaccggtgccatcggc
acggccatctcagccgtgtccgccgactcgtccgcctcagcgccctccttcgacaccccg
gcctcctccgacacccccgaggatcccgaggacgtcgagcacgaggacgaggaggacgac
gtcgatcgcgccctgcccgagtccgaccccgaggacgacgcgcccgacgaggccgagaac
gctgacgacggcgccgacatcgatgaggaggatgtcgacggccacgcgcccttcgatccc
tccgacgacgatgacgagcccgaggactccgcccgcgacgctggcgacgcaccggccgag
gtcaccttctccgacctcggtctgcccgccgacctgctcaaggccgtcaccgacatgggc
tatacgacccccacccccattcagcgcgaggccatcccggtcctcctggacgggcgcgac
gtcgtcggcgtggcccagaccggcaccggcaagaccgccgccttcgggctccccctcctc
gacgccgtcgacgcccgcgacggggaggtccaggccctcgtgctcgcccccacccgcgag
ctcgccctccagtccgccgacgcgatcacggagatggcgtcgcgctcgcgcggcctcgac
gtcgtcgccgtctacggcggcgccccctacggcccccagatcggcgcgctcaaatccggc
gcgcaggtcgtcgtcggcacgccgggccgcatcatcgacctcatcgacaagggcgcgctc
gtcctggatgcggtgaagtacttcgtcctcgacgaggccgacgagatgctgcgcatgggc
ttcgccgaggatgtggagaccatcgccgcctccctgccctccgagcgccgtaccgcgctg
ttctccgccaccatgccgcccgccatcgagcgggtggccgccgagcacctcgtcgacccc
gcgcgcatcgaggtctcccgccagtcctccaccgtcgacaccgttcaccagacctacgcg
gtggtccccttccgccacaagatcggcgcggtctcccgcgtcctggcggtcaccgaggcg
gaggccgccatcgtcttcgtgcgcaccaagtccaccgccgaggatgtcgccatcgagctg
gccgggcggggcatccaggccgccgcgatctccggcgacgtcccccagcgcgagcgcgag
cggctcgtcgagcgactgcgcgccggcaccctcgacgtcctcgtcgccactgacgtcgcg
gcccgcgggctggacgtggaccgcatcgggctcgtcgtcaactttgatgtgccccgcgag
gccgaggcctacgtccaccgcatcgggcgcaccggccgcgccggccgccacggcgaggcc
gtcaccttcctcacccccaaggagaagagcaagctccgccagatcgagcgcctgaccggc
acgcgcctggaggagatcaccctgccctcccccgccgacgtctccgcgcaccgcgcccac
aagctcctggccaaggccgccgcccgccacgagcgcggccgcctgagcatgtacaccccg
ctcatcgccgagctggacatcgacgccgaggagctcgctgccaccctgctcgccctcgcg
gtgggcgacgagggaccgcagcgccgccacgacgacgaccgcccgcgccggggccgtgag
cggcgcgaggtgagcgtcgacgacgagggcgccttcgtctcggccagcttcgagggaggc
cgcgagagccgccgtcgcgagcgtcccgagggcaaaccgggagcctcgcgcggcgggcgc
cgcgagcatgagggccccggcaccgtttaccggatcgaggtcggccatcgcgaccgggtc
atgcccggcgcgatcgtgggcgcgctggccaatgagggcgggatcagcggctcggacatc
ggcaagatcgacatcctgcagtccttctccctcgtcaccattcacgcgccgctgagcgag
gaccaactcgaggccatgcggcacgcgaccttctccgggcgcgagctgcgcatccgcccc
gatgagggcccgggccacggctggtccggccccgatgaccgcggctttcgcggtgaccgt
ggcgatcgcggcttccgcggtgaccgtggcttccgcggtgaccgtggcgatcgcggctat
cgcgaccgcgatgagcgcgggggccgcgacggcggctaccgcggtcgccctgaccgccgc
ggtgggtaccgggacgatcgcggcggccgtcgctgggaggaccgcggcggtcgtgactcg
ggcttccgggacgaccgcggctaccgctccgggcgcgacgagcgcgggggcaaccgcggc
ggctaccgcggaaaccgggacaaccgcgggtcctggggctcgcggcgcgctgactcctga
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