Actinomyces gaoshouyii: B6G06_07305
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Entry
B6G06_07305 CDS
T04911
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
actp
Actinomyces gaoshouyii
Pathway
actp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
actp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B6G06_07305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actp03021
]
B6G06_07305
03400 DNA repair and recombination proteins [BR:
actp03400
]
B6G06_07305
Enzymes [BR:
actp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B6G06_07305
Transcription machinery [BR:
actp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B6G06_07305
DNA repair and recombination proteins [BR:
actp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B6G06_07305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ARD42176
LinkDB
All DBs
Position
complement(1765558..1769514)
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIKSWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRSEFEVKKKHVEQAGEADVEARQRRLEED
LAAAEAEGAEASQRDKLRKAAEREMGAMRRKNQRTLEHMDKVWDRFVGLKVGDLEGDEVL
YRDMQADYGIYFKGAMGAQAIQDRLRGFDLEAEAEALSEVVASGAGQRKTRAIKRLKVIN
AFRMTGTKPESMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVSGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEASAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTQEPDPAVEVAK
DADGEEIVPAFSSFAEAVMAHDFGKLDVNATCDIRFTEGIVAPEGWQAPEGWSEGDPITL
RTSLGRALFNTALPEAFPYVNYTVDKKALGNIVNTLAESFPRVDVAASLDMLKSNGFYWS
TWSGITVAFADVVSPQAKAEILARHEAEAAQIEEQFDLGALTEEDRYSSLIDIWTKATAE
VAEAMRENFPHRNTVYQMVVSGARGNWDQIRQLAGMRGLVADPKQRLIDRPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTRKGLAKRLFTW
KDADGERFKDVSEILDTTVIGTTAARDVVDAEGNVIIPAGADIGTAEANAAIEAGIEEVT
VRSVLTCDSAVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAVVAEAAGTLAIEQDADGKRLIIKRDDGEEDLVVPV
SSRRRLLVVDGQHLEPGQALTEGPVDPKKILRLRSVGATQRHLVDEVQEVYRSQGVDIHS
KHIEVIVRQMLRRVTVLDPGDTTLLQGDLVDVMTYRSENRRVVAEGGKTASGRTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLVGLKENVILGKLIPAGTGLARYSDIE
VEPTEETRAEVFSRTGFSEDMFGVGESIALDDFSFGGDFRADFSDDFRTGFNSQDVEF
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacgtcttcgatcgcatccagctcggactggccaccgcggaggacatc
aagtcctggtcgcacggtgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
ccggagaaggacggcctgttcggcgagcagatcttcggccccaccagggactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcgtctgcgagcgctgcggtgtg
gaggtcacccgctctaaggtgcgccgcgagcggatggcccacatcaagctggccgccccc
gtcacccacatctggtacttcaagggcgttccctcgcgcctggggtacctgctcaacctc
gcccccaaggacctggagaaggtcatctacttcgcggcctacatggtgaccgaggtcgat
gaggagggccgccacgacgacctgccctccctgcgctccgagttcgaggtgaagaagaag
cacgtcgagcaggccggcgaggccgatgtcgaggcccgccagcgccgcctggaagaggat
ttggccgccgccgaggcggagggtgccgaggcctcccagcgcgacaagctccgcaaggcc
gccgagcgcgagatgggcgccatgcgccgcaagaaccagcggacgctggagcacatggac
aaggtctgggatcgcttcgtgggcctcaaagtcggggacctcgagggcgatgaggtcctc
taccgcgacatgcaggcggactacggcatctacttcaagggggccatgggcgcccaggcc
attcaggatcgcctgcgcggcttcgacctggaggcggaggccgaggccctgtccgaggtg
gtcgcctccggtgccgggcagcgcaagacccgcgccatcaagcgcctcaaggtcatcaac
gccttccgcatgaccggcaccaagccggagtcgatggtcctggacaacatcccggtcatc
ccgccggacctgcgccccatggtgcagctcgacggtggccgcttcgccacctcggacctc
aatgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctcatggacttg
ggcgccccgacgatcatcgtcaacaacgagaagcgcatgctccaggatgccgtcgacgcc
ctcttcgacaacggccgccgcggccgtcccgtctccggcgtgggcaatcgcccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgcgtggactactcgggccgctccgtcatcgtggtgggcccccagctcaagctccaccag
tgcggcctgcccagccagatggccctggagctgttcaagcccttcgtcatgaagcggctc
gtcgagctcaaggaggcccagaacgtcaaggccgccaagcggatggtggagcgcgccaac
ccgaaggtctgggacgtcctggccgaggtcatccgcgagcaccccgtgctgctcaaccgc
gcccccaccctccaccgcctgggcatccaggccttcgagccccagctcatcgagggcaag
gccatccagctgcacccgctcgtgtgcggcgccttcaacgcggacttcgacggcgaccag
atggcggtccacctgccgctgggcgccgaggcctccgcagaggcccgcatcctcatgctc
tcgtccaacaacatcctcaagccctccgacgggcgccccgtgaccatgcccagccaggac
atgatcatcggcacctactacctcacccaggagcccgacccggccgtcgaggtcgccaag
gacgccgacggcgaggagatcgtcccggccttctcctccttcgcggaggcggtcatggcg
cacgatttcggcaagctcgatgtcaacgccacctgcgatatccgcttcaccgaggggatc
gtcgcccccgaggggtggcaggcccccgagggctggagcgagggcgacccgatcaccctg
cgcacctcgttgggccgggccctgttcaacacggcgctgcccgaggccttcccctacgtg
aactacacagtggacaagaaggccctgggcaatatcgtcaacaccctggccgagtccttc
ccgcgcgtggacgtggccgcctccctcgacatgctcaagtcgaacggcttctactggtcc
acctggtccggcatcacggtcgccttcgccgacgtcgtctccccgcaggccaaggcggag
atcctggcccgccacgaggccgaggccgcccagatcgaggagcagttcgacctcggcgcg
ctgaccgaggaggaccgctactcctcgctcatcgacatctggaccaaggccacggccgag
gtcgccgaggccatgcgcgagaacttcccgcaccgcaacaccgtctaccagatggtggtc
tccggggcgcgaggcaactgggaccagatccgtcagctcgccggcatgcgcggcctggtg
gcggacccgaagcagcgcctcatcgaccgccccatcaagtcgaactaccgcgagggcctg
agcgtcctggagtacttcatcgccacgcacggcgcccgcaagggcctggcggacaccgct
ctgcggaccgccgactccggctacctcacccgccgcctcgtcgacgtgtcccaggacgtc
atcgtgcgcgaggacgactgcggcacccgcaagggcctcgccaagcgccttttcacctgg
aaggacgccgacggcgagcgcttcaaggacgtctcggagatcctcgacaccacggtcatc
ggcaccaccgcggcccgggacgtcgtcgatgccgagggcaatgtcatcattcccgccggt
gctgacatcggcaccgccgaggccaacgccgcgatcgaggccggcatcgaagaggtcacg
gtccgttctgtgctgacctgcgactccgccgtcggcacctgcgctgcctgctacggccgc
tccctggccaccggcaagcgcgtggacatcggcgaggccgtgggcatcatcgccgcccag
tccatcggcgagcccggcacgcagctgacgatgcgcaccttccacaccggtggcgccgcc
ggcgccgcggacatcacgcagggccttccccgcgtgcaggagctcttcgaggcccgcacc
cccaagggcgaggccgtcgtggccgaggccgcgggcacgctggccatcgagcaggacgcc
gacggcaagcgcctgatcatcaagcgcgacgatggcgaggaggacctcgtggtccccgtc
tcctcgcgccgccgcctcctggtggtcgacggccagcacctcgagcccggccaggctctc
accgagggcccggtggaccccaagaagatcctgcgcctgcgcagcgtcggcgccacccag
cgccacctcgtggacgaggtccaggaggtctaccgctcccagggcgtggacatccactcc
aagcacatcgaggtcatcgtgcgccagatgctgcgtcgcgtgaccgtgctcgacccgggc
gataccacgctcctgcagggcgacctcgtggacgtcatgacctaccgctcggagaaccgc
cgcgtcgtggccgagggcggtaagaccgcctccgggcgcaccgaactcatgggcatcacc
aaggcctccctggccacggactcctggctgagcgccgcctccttccaggagaccacgcgc
gtgctcaccgaggccgccatgaacggcaagtccgacccgctggtggggctgaaggagaac
gtcatcctgggcaagctcatccccgccggcacgggcctggcccgctactcggacatcgag
gtggagcccaccgaggagacgagggcggaggtcttctcccgcaccggcttctccgaggac
atgttcggcgtgggggagagtatcgcgctggacgacttctccttcggcggcgacttccgc
gcggatttctccgacgatttccgcacgggtttcaacagccaggacgtggagttctga
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