Actinomyces gaoshouyii: B6G06_08810
Help
Entry
B6G06_08810 CDS
T04911
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actp
Actinomyces gaoshouyii
Brite
KEGG Orthology (KO) [BR:
actp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actp03032
]
B6G06_08810
03400 DNA repair and recombination proteins [BR:
actp03400
]
B6G06_08810
Enzymes [BR:
actp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B6G06_08810
DNA replication proteins [BR:
actp03032
]
Prokaryotic type
DNA Topoisomerases
B6G06_08810
DNA repair and recombination proteins [BR:
actp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B6G06_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ARD42422
LinkDB
All DBs
Position
complement(2109281..2112262)
Genome browser
AA seq
993 aa
AA seq
DB search
MRARRFSNVAGRFPVPRKLVIVESPNKVRSIAGYLGPDYDVEASVGHIRDLAQPSELPAE
EKKGPYGRFAVDVEDGFKPYYVVNPDKKKTVTQLKKALKEADELYLATDDDREGEAIAWH
LLEVLKPKVPVKRMTFTEITREAVTRALDSTRDIDSHRVDAQETRRILDRLVGYEVSPVL
WRKVRAGLSAGRVQSVATRLVVERERERMAFVPAGYWGVEARLSTGLSGLDAAARAEGSF
TARLAALDGRRVATGRDFTDGGELTASARKASTVHLHEGAAKAIAEAVMRAVPRVAEVEE
KPYKRRPAAPFTTSTLQQEASRKLRMNPRETMRVAQGLYENGFITYMRTDSTVLSGQAVA
AARAQVAELYGPEYVPAKPRVYATKTKGAQEAHEAIRPAGDHFRTPAQVSGELSGAQFRL
YELIWKRTVASQMADAVGSTATVRVEVPLAPADGGSRDSGQTFSTASFTASGTVITFRGF
LAAYEEGRDAERYSEAVAGSAGEAGGSGEAGGAAGAGTTGSGAGGGGAKPRETRLPAMIA
GQALAALGAEAAGHETTPPPRYTEASLVKALEEREIGRPSTYAATMSTISDRGYVDHRGQ
ALVPTWLAFAVTRLLEENFAELVDYDFTASMEADLDRIAAGEADRGAWLARFYFGADGAG
LSDAVGSVEDAGSVGGGGQDGERSLRAMLDSLGEIDARAVNSVPIGEGMTLRVGRYGPYL
EDEEGKRANVPADLAPDELTVVKARELFERAADDGRELGTDPSTGHTIIAKDGRYGPYVT
EVLPAPEGGADAQEATASGAKRKRGAKKAAGPKPRTASLLKSMDLSTVTLEQALDLLSLP
RVVGQDAEGVDITAQNGRFGPYLKRGTDSRSLASEEQIFTVTLEEALALFAQPKTRRGQA
AARGPLRELGTDPATGKPVVIKDGRFGPYFTDGETNVTLRRGDDPATVTPERAYELLAEK
RAKGPAKKRTTRKTATKKTTAKKKSTSAETGRK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacggcggttttccaacgtcgcaggaaggttccccgtgccccgcaagctcgtc
atcgtcgagtcccccaacaaggtccgctcgatcgccggatacctgggccccgattacgat
gtcgaggcctccgtgggccatatccgcgacctcgcccaaccctcagagctgcccgccgag
gagaagaagggcccctacgggcgcttcgccgtcgacgtcgaggacgggttcaagccgtat
tacgtcgtcaaccccgacaagaagaagaccgtcacccagctcaagaaggccctcaaggag
gccgacgagctctatctggccaccgacgacgaccgtgagggcgaggccatcgcctggcac
ctcctggaggtcctcaagcccaaggtgccggtcaagcgcatgaccttcaccgagatcacc
agggaggcggtcacccgcgccctggactccacgcgggacatcgactcccaccgcgtggac
gcccaggagacccgccgcatcctcgaccggctcgtcggctacgaggtcagccccgttctg
tggcgcaaggtccgcgcgggcctgtccgccgggcgcgtgcagtccgtggccacccgcctc
gtggtggagcgcgagcgcgagcgcatggccttcgtgcccgccggctactggggcgttgag
gcccgcctgagcacgggcctgagcgggctcgatgcggccgcccgcgctgagggctccttc
actgcccgtctggccgctctcgacgggcgccgcgtggcgaccgggcgcgacttcaccgac
ggcggcgagttgacggcgtcggcccgcaaggcgagcaccgtccacctccacgagggcgcg
gccaaggccatcgccgaggccgttatgcgcgccgtcccgcgcgtggccgaggttgaggag
aagccctacaagcggcgtcctgctgctcccttcaccacctccaccctccagcaggaggcc
tcccgcaagctccgcatgaacccgcgtgagaccatgcgcgtggcgcagggcctgtacgag
aacggcttcatcacctacatgcgcaccgactccacggtgctctccggccaggccgtggcc
gccgcccgcgcgcaggtcgccgagctctacgggcccgagtacgtgcccgccaagccgcgc
gtctacgccacgaagaccaagggcgcccaggaggcccacgaggccatccggcccgccggc
gaccacttccgcacccctgcgcaggtcagtggagaactcagtggcgcgcagttccgcctc
tacgagctcatctggaagcggaccgtcgcctcccagatggccgacgccgtcggctccacc
gcgaccgtccgcgtggaggtgcccctggcgcccgccgatggcggctcgcgagactccggg
cagaccttctccacagcctccttcaccgcctcgggcaccgtcatcaccttccgcggattc
ctggccgcctacgaggaggggcgcgatgccgagcgctattccgaggccgtggcgggcagt
gccggtgaggccggcggcagcggtgaggccggcggcgctgctggggcgggcaccacgggc
agtggcgccggaggtgggggcgcgaagccgcgcgagacgcgcttgcccgccatgatcgcc
gggcaggcgctcgccgccctcggcgccgaggccgccgggcatgagaccacgccgccgccg
cgctacaccgaggcctccttggtcaaggccctggaggagcgcgagatcggtcgcccctcc
acctacgcagccaccatgtccaccatctctgaccgcggctacgtggatcaccgcggccaa
gccctcgtgcccacctggctggccttcgccgtcacccgcctgctggaggagaacttcgcc
gagctggtggactacgacttcaccgcctccatggaggccgacctcgaccgtattgctgct
ggggaggcggatcggggtgcttggttggcccgtttctatttcggggctgatggggcgggt
ttgtcggatgctgtggggtccgtggaggatgctgggagtgttgggggagggggccaggat
ggcgagcgcagcttgcgcgccatgcttgacagccttggggagatcgatgctcgggctgtt
aattccgtgccgattggtgagggcatgaccctgcgggtggggcgctacggcccctacctg
gaggatgaggagggcaagcgcgctaacgtgcccgccgaccttgccccggatgagctgacg
gtcgtcaaggcgcgtgagctgttcgagcgggctgccgatgatggccgtgagctgggcacg
gacccctctacagggcacacgattatcgctaaggatggtcgttacgggccctatgtcacg
gaggtgctgcccgccccggagggcggggccgacgcgcaggaggcgacggcgtcgggggcg
aagaggaagcggggcgcgaagaaggccgccgggcccaagccgcgcacggcgagcctgctg
aagtccatggacctgtccaccgtcaccctggagcaggcgctcgacctgctgagcctgccg
cgcgtggtgggccaggacgctgagggcgtggacatcaccgcgcagaacgggcgcttcggg
ccctacctgaagagggggacggactcgcgctccctggccagtgaggagcagatcttcacg
gtgaccctggaggaggcgctcgcgctcttcgcccagcccaagacccgccgtggtcaggcc
gccgcgcgcgggcccctgcgcgagctgggcacggacccggccaccggcaagcccgtggtc
atcaaggacggccgcttcggcccctatttcacggacggcgagacgaacgtgacgctgcgc
cgtggcgacgacccggccaccgtgaccccggagcgcgcctacgagctcctcgccgagaag
cgcgccaagggcccggccaagaagcgcaccacccgcaagaccgccacgaagaagacgacg
gcgaagaagaagtccacctccgccgagaccggtcgaaaatag
DBGET
integrated database retrieval system
