Actinoallomurus sp. NBC_01490: OG417_01965
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Entry
OG417_01965 CDS
T09731
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
actq
Actinoallomurus sp. NBC_01490
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actq03032
]
OG417_01965 (gyrB)
03400 DNA repair and recombination proteins [BR:
actq03400
]
OG417_01965 (gyrB)
Enzymes [BR:
actq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OG417_01965 (gyrB)
DNA replication proteins [BR:
actq03032
]
Prokaryotic type
DNA Topoisomerases
OG417_01965 (gyrB)
DNA repair and recombination proteins [BR:
actq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OG417_01965 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WUU99588
UniProt:
A0AAU5X910
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All DBs
Position
390574..392514
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AA seq
646 aa
AA seq
DB search
MAYDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNSVDEALAGYADTITVTL
LADGGVRVTDNGRGIPVGLHPVEKRPAIELVLTTLHAGGKFDSKSYAVSGGLHGVGSAVV
NALSTRLEAEVRVDGHVWRQSYTWRGADGPLAKGEATDETGTVISFWPDGSIFETLEWNF
ETLSRRMQEMAFLNRGLSITLTDERPEHINGEPKTVTYHYEGGIEDFVRYLNAKKEVVHQ
SVIAFSDEVDGMSVEVAMQWSGSYSESVHTFANTINTAEGGTHEEGFRAALTTVVNKYAR
EQKLLREGKDDNLAGEDVREGLTAIISIKLADPQFEGQTKTKLGNTEAKSFVQRAMYENL
RGWLDANPGEAKEVINKATQAARARIAARQARDLTRRKSLLESTSLPGKLSDCQSTDPGK
CEIYVVEGDSAGGSAKGGRNPQYQAILPIRGKILNVEKARIDRVLKNNEVQAMITALGTG
IHDEFDIEKLRYHKIILMADADVDGQHIRTLLLTLLFRFMKPLVEAGHVYLAQPPLYKIK
WDARGQDSDYAYSDRERDAIIEQGIAAGKRDPRPRDGVQRFKGLGEMNATELWDTTMDPE
NRILLQVTLDDAAQADELFTVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtacgacgctagctcgatcaccgtccttgaaggcctggaggcggtccgtaagcgc
cccgggatgtacatcggttccaccggcgaacgtggtctgcaccacctcgtctacgagatc
gtggacaactcggtcgacgaggctctcgccggttacgccgacaccatcacggtgacactg
ctcgccgatggtggggtccgcgtcaccgacaacggccgcggtatccccgtgggcctgcat
cccgtcgaaaagcgtccggcgatcgaactcgtcctcacgaccctgcacgccggcggcaag
ttcgacagcaagtcctacgccgtctccggcggcctgcacggtgtcggctccgcagtggtg
aacgcactgtccacccggctggaggccgaggtgcgggttgacggccacgtgtggcgtcag
tcctacacctggcggggtgccgatggtccgctggcaaagggcgaggcgaccgacgagacc
ggcaccgtcatcagcttctggcccgacggctcgatcttcgagacgctcgaatggaacttc
gagaccctcagccggcgcatgcaggagatggccttcctcaaccgagggctgtcgatcacg
ctgaccgacgagcggcccgagcacatcaacggcgagcccaagaccgtcacgtatcactac
gagggcggcatcgaggacttcgtccgctacctcaacgccaagaaggaagtcgtccaccag
tcggtgatcgcgttcagcgacgaggtcgacggcatgtcggtcgaggtcgccatgcagtgg
agcgggtcctactccgagtccgtccacaccttcgccaacacgatcaacacggcggagggc
ggcacccacgaggagggcttccgcgccgcgctgacgaccgtcgtcaacaagtacgcgcgc
gagcagaagctcctgcgcgagggcaaggacgacaacctcgccggtgaggacgtacgcgag
ggtctgaccgcgatcatctcgatcaagctggccgacccgcagttcgagggccagaccaag
accaagctcggcaacaccgaggccaagtcgttcgtccagcgcgcgatgtacgagaacctg
cgcggctggctcgacgccaaccccggcgaggccaaggaggtcatcaacaaggccacgcag
gcggcacgcgcgcgcatcgccgcccggcaggcccgcgacctgacccgccgcaagagcctg
ctggagtcgacctcgctgcccggcaagctgtcggactgccagtcgaccgacccgggcaag
tgcgagatctacgtcgtggagggcgactcggccggcggctcggccaagggcggccgcaac
ccgcagtaccaggcgatcctcccgatccgcggcaagatcctcaacgtggagaaggcccgc
atcgaccgggtcctgaagaacaacgaggtccaggcgatgatcaccgccctgggcaccggc
atccacgacgagttcgacatcgagaagctgcggtaccacaagatcatcctgatggccgac
gccgacgtcgacggccagcacatccgcacgctgctgctgaccctgctgttccgcttcatg
aagcccctggtcgaggccggccacgtctacctcgcccagcccccgctctacaagatcaag
tgggacgcccgcggtcaggactccgactacgcctactccgaccgcgagcgcgacgcgatc
atcgagcagggcatcgcggcgggcaaacgcgacccgcgcccccgcgacggcgtgcagcgc
ttcaagggcctcggcgagatgaacgccacggagctgtgggacaccaccatggacccggag
aaccgcatcctgctgcaggtcaccctcgacgacgccgcccaggccgacgagctgttcacc
gtgctcatgggtgaagacgtcgaggcccggcgctcgttcatccagcgcaacgccaaggac
gtgcgcttcctcgacatctga
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