Actinoallomurus sp. NBC_01490: OG417_11705
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Entry
OG417_11705 CDS
T09731
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actq
Actinoallomurus sp. NBC_01490
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actq03032
]
OG417_11705
03400 DNA repair and recombination proteins [BR:
actq03400
]
OG417_11705
Enzymes [BR:
actq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OG417_11705
DNA replication proteins [BR:
actq03032
]
Prokaryotic type
DNA Topoisomerases
OG417_11705
DNA repair and recombination proteins [BR:
actq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OG417_11705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WUV01420
UniProt:
A0AAU5XEB3
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All DBs
Position
2363669..2364727
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AA seq
352 aa
AA seq
DB search
MDDTREDALTVELVRSDLGGPGIRRRRCGRGFRYFDGEAVAIRNPDTLARIKALVIPPAW
EDVWICPDENGHIQAVGTDAAGRRQYRYHDRWRERRDREKHDRVLAFGAALPRVRERVER
HLDGRGLGRERVLAAAIRLIDLGFFRPGGEEYAAENGTYGLATIRREHVTCSHGEIVFDY
TAKGAKEREQALVDDQVMAVVRSLKRRRSGGEELLAYRSGPRWHNVTAADINDYLREISD
GEFTAKDFRTWHATVLAAVGLAVSRPAATTANARRRAVVRVVREVSEYLGNTPAVARASY
IDPRIIELYEQGVTVEPALADLGKGRDLGELATRGPAEKAVLKILTDCAGSP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtggatgacacgcgagaggacgccctgacggtcgagctcgtgcgcagcgacctcggcggt
ccgggcattcgccggagacggtgtggccgcgggttccgctacttcgacggggaggccgtc
gcgatcaggaatccggacacgctcgcccgcatcaaggcgctggtgatcccgccggcgtgg
gaggacgtgtggatctgtcccgacgagaacgggcacatccaggcggtcgggaccgacgcg
gcgggccggcggcagtaccggtaccacgaccggtggcgtgagcggcgcgaccgggagaag
cacgaccgggtcctggcgttcggcgccgccctgccccgcgtccgtgagcgggtcgagcgt
cacctcgacggccggggactgggccgcgaacgagtgctcgccgccgcgattcgcctgatc
gacctgggattcttccggccgggcggcgaggagtacgccgcggagaacggcacgtacggc
ctggcgaccatccgccgcgagcacgtcacgtgctcgcacggcgaaatcgtcttcgactac
accgccaagggcgccaaggagcgcgagcaggccctcgtcgacgaccaggtcatggccgtc
gtacggagcctgaagcggcgccggagcggcggggaggaactcctggcctaccggagcggc
ccgcgctggcacaacgtcaccgccgcggacatcaacgactacctccgggagatctccgat
ggggagttcaccgccaaggacttccgcacctggcacgccaccgtgctcgcggcggtgggg
ctcgccgtctccagacccgccgcgaccaccgccaacgcgcgcaggcgcgcggtcgtccgg
gtcgtgcgcgaggtgtcggagtacctcggcaacacccccgccgtcgcgcgggcctcctac
atcgacccgcggatcatcgagctgtacgagcagggcgtcacggtcgagccggcgctcgcc
gacctcggcaagggacgcgacctcggcgagctcgccacgcgcggtccggcggagaaggcc
gtcctgaagatcctcaccgactgcgccgggtcaccgtga
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