Actinoallomurus sp. NBC_01490: OG417_14780
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Entry
OG417_14780 CDS
T09731
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
actq
Actinoallomurus sp. NBC_01490
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actq03021
]
OG417_14780
Transcription machinery [BR:
actq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OG417_14780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_5
MarR
DUF7343
HTH_Crp_2
HTH_24
HTH_3
Sigma70_ECF
NirdL-like_HTH
HTH_28
IF2_N
HTH_AraC
GerE
Dcc1
Motif
Other DBs
NCBI-ProteinID:
WUV04457
UniProt:
A0AAU5XLK5
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All DBs
Position
complement(3071720..3072478)
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AA seq
252 aa
AA seq
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MPDRARARTLFERLSTLPDGDPERQRIRDELVELHLPLVEYLARRFRNRGEWLDDLIQVA
TIGLIKSIDRFDLERGVEFSTYATPTIVGEIKRHFRDKGWAVRVPRRLQELKLSLTKAIS
DLAQREGRAPTVSELAEHLQMSEEEVLEGLESANAYSTVSLDAPDSGDEDAPAVADSLGI
VDDALEGVEYRESLKPLLEKLPAREKRILLLRFFGNMTQSQIAAELGISQMHVSRLLART
LAQLRDGLTADD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaccgcgcgcgggcacgcacgctgttcgaacgcctctccacgcttcccgatggc
gacccggagcgccagcgcatccgcgacgagctggtcgagctgcaccttccgctcgtcgaa
tacctcgcgcgccggttccgcaaccgcggcgagtggctcgacgacctgatccaggtggcg
acgatcgggctgatcaagtccatcgaccgcttcgatctcgaacgcggggtggagttctcc
acgtacgcgacgccgacgatcgtcggtgagatcaagcgtcacttccgcgacaagggatgg
gcggtccgcgtcccccggcggctccaggagctcaagctgtcgctgaccaaggcgataagc
gacctcgcccagcgcgagggccgcgcgccgaccgtcagcgagctggccgagcacctgcag
atgagcgaggaagaggtgctggaggggctggagtcggccaacgcctactccacggtctcc
ctggacgcccccgactcgggcgacgaggacgcgccggcggtcgccgactcgctcggcatc
gtcgacgacgcccttgagggcgtcgaataccgcgagtcgctcaagccgctgctggaaaag
ctgcccgcacgcgagaagcgcatcctgctgctgcggttcttcggcaacatgacgcagtcg
cagatcgcggccgagctgggcatctcgcagatgcacgtgtcccggctgctggcccgcacc
ctcgcccagctgcgggacggcctcaccgccgacgactga
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