Actinoallomurus sp. NBC_01490: OG417_28050
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Entry
OG417_28050 CDS
T09731
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
actq
Actinoallomurus sp. NBC_01490
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actq03016
]
OG417_28050
Enzymes [BR:
actq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OG417_28050
Transfer RNA biogenesis [BR:
actq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OG417_28050
Prokaryotic type
tRNA splicing ligases
OG417_28050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WUU94267
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Position
6019963..6021153
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AA seq
396 aa
AA seq
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MPYTMRGGHVPIRIWTDPAEVEPGALDQLRNVANLPWVHGVAVMPDVHYGKGATVGSVIA
MRDAVAPAAVGVDIGCGMTAVKSSLTVEDLPDDLSRLRAKIEKAVPVGRGAHRTAVDPSA
VPGLKERGWYEFWQAYDELAPVARSRRGRATSQLGTLGSGNHFLEVCADDEGAVWVVLHS
GSRNIGKELAEHHIEAAMRLPHNQDLPDRDLAVFLSGTRKMEEYRRDLFWAQDYARRNRA
VMMALTQNVITRYFAGKRVRWDDVISCHHNYVAEETYDGVELLVTRKGAIRAGDGDLGII
PGSMATGTYIVRGLGNEKAFNSASHGAGRRMSRNRAKKSFTVDDLIEQTRGVECRKDSGV
IDEIPGAYKDIESVIEAQTDLVEVVAHLRQLVCVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacacgatgcgaggcggtcacgtcccgatccggatctggaccgatcccgccgag
gtcgagccgggcgcgctcgaccagctccgcaacgtcgcgaacctgccctgggtgcacggc
gtggcggtcatgccggacgtgcactacggcaagggcgcgacggtcggctcggtcatcgcg
atgcgcgacgcggtggccccggcggcggtcggggtggacatcggctgcgggatgaccgcg
gtcaagtccagcctcaccgtcgaggacctgcccgacgacctgagccgcctgcgggccaag
atcgagaaggccgtgccggtcgggcgcggcgcgcacaggacggccgtggacccctcggcc
gtgccggggctgaaggaacgcggctggtacgagttctggcaggcctacgacgagctggcg
ccggtcgcccggtcccgccggggccgcgcgacgtcccagctgggcacgctcgggtcgggc
aaccacttcctggaggtgtgcgcggacgacgagggcgcggtgtgggtcgtgctccactcg
gggtcgcgcaacatcggcaaggagctggccgaacaccacatcgaggccgcgatgcggctg
ccgcacaaccaggacctgccggaccgcgacctggcggtgttccttagcgggacgcgcaag
atggaggagtaccgccgggacctgttctgggcgcaggactacgcgcggcgcaaccgcgcc
gtgatgatggcgctgacccagaacgtcatcacgcgttacttcgccggcaagcgggtccgc
tgggacgacgtcatctcctgccaccacaactacgtggcggaggagacctacgacggtgtc
gagctgctcgtcacccgcaagggcgcgatccgcgcgggagacggcgatctgggcatcatc
ccgggctcgatggcgacgggcacctacatcgtccgcggtctgggcaacgagaaggccttc
aactccgcgtcgcacggcgcgggccgcaggatgagccgtaaccgggccaagaagtccttc
acggtcgacgacctgatcgagcagacgcggggcgtcgagtgccgcaaggattcgggtgtc
atcgacgagatccccggcgcgtacaaggacatcgagtcggtgatcgaggcgcagaccgac
ctcgtggaggtcgtggcccacctgcgccagctcgtctgcgtcaagggctga
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