Actinoallomurus sp. NBC_01490: OG417_41855
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Entry
OG417_41855 CDS
T09731
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
actq
Actinoallomurus sp. NBC_01490
Pathway
actq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OG417_41855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actq03019
]
OG417_41855
03009 Ribosome biogenesis [BR:
actq03009
]
OG417_41855
Enzymes [BR:
actq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
OG417_41855
Messenger RNA biogenesis [BR:
actq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OG417_41855
Ribosome biogenesis [BR:
actq03009
]
Prokaryotic type
rRNA processing factors
OG417_41855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
WUU96887
UniProt:
A0AAU5WYW4
LinkDB
All DBs
Position
complement(9060162..9062642)
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AA seq
826 aa
AA seq
DB search
MLDNEIGDATGGTENTGNESTGETTKVSRPRRASRPAGPPPEPEESTPSAPAGEDQARPA
KTTRTRRTTRKAAAEAPEAPAAETPVKAEATVKTEPAAPAVSSAPKGPEVPDAAFQPPMV
VFQPPAMPAEEAPPRRPKAESQAKPKAEPKQEAPKADEADDQADDDEGTDKGGRRRRRRG
GRGRGKAREGQEAEDTGKETDEDSQQADEESADEGEEREEAGSSSSRRRRRRRRRAGGGE
GDDIAGDDPPNTVVHVREPRAVEDEVQAVKGSTRLEAKKQRRREGREQGRRRPPIVTESE
FLARRESVERVMVIRSEGDRTQIGILEDNVLVEHYVDRSSHQSYVGNVYLGKVQNVLPSM
EAAFVDIGKGRNAVLYAGEVNWDLAGLEGQPRRIESALKSGQSVLVQVTKDPLGHKGARL
TSQISLPGRYLVYVPDGSMTGISRKLPDKERTRLKQILKKVMPENAGVIVRTAAEGAAEE
ELARDVSRLSAQWENIKRQSKTANAPAMLYGEPDLTIRVVRDIFNEDFSKLVVQGEDAWD
MVKEYVGYVAPHLADRLELWSDGEDIFSGYRVDEQIAKAMERKVWLPSGGSLVIDRTEAM
TVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVHQLRLRDIGGIIVIDFIDMVLESNRDL
VLRRMLECLSRDRTKHQVAEVTSLGLVQMTRKRVGGGLLESFSEPCECCNGRGIHVTLSP
VEPKADKSGGSSRRRKRKGDIEKAVEDKMAQAERAKEAAKPDAGEPVKEPAMADSGENGH
GAAEPVAADHAGPADHAEVSDTEPSANGRRRRSRRSPRAKSEAAAD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacaacgagatcggtgacgccacaggcggcactgagaacaccggcaatgaatcg
actggtgagaccaccaaggtgagccgcccgcgccgggccagccgcccggccgggccgcct
cctgagcccgaggagagcacaccgtccgcgcccgcaggcgaggaccaggctcgtcccgcc
aagacgacccgcacccgccggaccacgcgcaaggccgcggccgaggcgccggaggcaccg
gccgccgagacgccggtgaaggccgaggccacggtgaagaccgagccggcggcgccggcc
gtctccagcgcgcccaagggcccggaggtccccgacgcggcgttccagccgccgatggtc
gtcttccagcctccggccatgcccgccgaggaggcgccgccgcgccggcccaaggccgag
agccaggccaagcccaaggccgagccgaagcaggaggcgccgaaggccgacgaggccgac
gaccaggccgacgacgacgagggcaccgacaagggcggccgccgccgtcgccgccgtggc
ggccgtggccgtggcaaggcccgcgagggccaggaggccgaggacaccggcaaggagacc
gacgaggactcccagcaggccgacgaggagtccgccgacgagggcgaggagcgcgaggag
gccggctcctcttcgagccgccgtcgtcgccgccgtcgtcgccgcgcgggcgggggcgag
ggcgacgacatcgcgggcgacgacccgcccaacaccgtcgtgcacgtccgcgagccccgc
gccgtcgaggacgaggtgcaggcggtcaagggctccacacgcctggaggccaagaagcag
cgccgccgcgaaggacgcgagcagggccgccgccggccgccgatcgtcaccgagtcggag
ttcctggcccgccgcgagtccgtcgagcgcgtcatggtgatccgctcggagggcgaccgt
acgcagatcggcatcctcgaggacaacgtgctggtcgagcactacgtcgaccggtcgagc
caccagtcctacgtcggcaacgtctacctcggcaaggtgcagaacgtcctgccgtcgatg
gaggcggcgttcgtcgacatcggcaagggtcgcaacgccgtgctgtacgccggcgaggtc
aactgggacctggccgggctggagggccagccgcgccgcatcgagtcggcgctcaagtcc
ggccagtcggtcctcgtccaggtcaccaaggacccgctcgggcacaagggcgcgcgcctg
accagccagatctcgcttccgggccgctacctcgtgtacgtcccggacggctcgatgacc
ggcatcagccgcaagctgcccgacaaggagcgcacgcgcctcaagcagatcctcaagaag
gtcatgcccgagaacgccggcgtgatcgtccggaccgccgccgagggcgcggccgaggag
gagctggcccgcgacgtctcgcgcctgtccgcgcagtgggagaacatcaagcgccagtcc
aagacggcgaacgccccggccatgctgtacggcgagccggacctgaccatccgggtcgtg
cgcgacatcttcaacgaggacttcagcaagctcgtggttcagggcgaggacgcctgggac
atggtcaaggagtacgtcggctacgtcgcgccgcacctggccgaccggctcgagctgtgg
tccgacggtgaggacatcttctccggctaccgcgtggacgagcagatcgccaaggccatg
gagcgcaaggtgtggctgccgagcggcggctcgctggtcatcgaccgcaccgaggccatg
acggtcgtcgacgtcaacaccggaaagttcaccgggcagggcggcaacctcgaagagacc
gtcacccgcaacaacctcgaggccgccgaggagatcgtccaccagctccggctgcgtgac
atcggcggcatcatcgtcatcgacttcatcgacatggtcctggagagcaaccgggacctg
gtgctgcgccggatgctcgagtgcctgtcgcgtgaccgcaccaagcaccaggtcgccgag
gtgacctcgctcgggctcgtccagatgacccgtaagcgcgtcggcggggggctgctggag
tccttctccgagccgtgcgagtgctgcaacggccgcgggatccacgtgacgctctcgccg
gtcgagccgaaggccgacaagtccggcgggtcgagccggcgccgcaagcgcaagggcgac
atcgagaaggccgtcgaggacaagatggcccaggccgagcgcgccaaggaggccgccaag
ccggacgccggagagccggtcaaggagcccgccatggcggacagcggggagaacggtcac
ggcgccgccgagcccgtggccgcggaccacgccggtccggccgaccacgccgaggtgagc
gacaccgagccctccgccaacggacgccgccggcgttcccgccggtcgccgcgggccaag
tccgaggctgcggccgactga
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