Actinoallomurus sp. NBC_01490: OG417_52550
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Entry
OG417_52550 CDS
T09731
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
actq
Actinoallomurus sp. NBC_01490
Pathway
actq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OG417_52550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actq03019
]
OG417_52550
03400 DNA repair and recombination proteins [BR:
actq03400
]
OG417_52550
Enzymes [BR:
actq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OG417_52550
Messenger RNA biogenesis [BR:
actq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OG417_52550
DNA repair and recombination proteins [BR:
actq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OG417_52550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF3553
PcrA_UvrD_tudor
ResIII
AAA_30
TPP_enzyme_M
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WUU98904
UniProt:
A0AAU5X525
LinkDB
All DBs
Position
complement(11362741..11364333)
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AA seq
530 aa
AA seq
DB search
MASRADVAGLAEKVFGIPELRPAQREAAETLVTGRDGLVVMPSGGGKSVIYQAAAVALGG
PAVVISPLVSLQRDQTRRLRERGLPAVALNATAGEKRRSEAYGLLRGGAPAFVFLAPEQL
VRDDVRAVLREAPPVLLTVDEAHCVSAWGHDFRPDYLRIGGVLDGLPRRPVVAALTATAA
PPVREEIVARLGLRDPARFVSGFDRPEIRLAVPGFHDAGGKEDAVVRLVGELPGSGLVYA
ATRREAEAYAERLGVPAYHAGMRKSAREAAQRAFMDGATIAATSAFGMGIDRPDVRFVVH
ASAPGSLDEYYQEIGRAGRDGEPATAVCCYRAEDLGLQRFFAGGRPDEDLLARVAEAADG
PVSRRELAERAEVSGRRLGGALNLLESAGAVRLGRRVEPVPGAPAPAEAAAAAVQAAERH
RSIERSRVEMMRRYAELTDCRRRFLLRYFGEFTQDPCGRCDNCEAGWSTPADEEDATYAP
GERVHHRDWGRGTLLGYKDGRLTVVFDHVGYKELLEDTVAGEDLLRPVRD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgggcggatgtcgctggacttgccgagaaggtgttcggcattcccgagctg
cggcctgcgcagcgagaggccgccgagacgctggtcacgggccgggacggcctggtggtg
atgcccagcgggggcggaaagtcggtgatctaccaggcggcggcggtcgcgctcggcggt
ccggcggtggtgatctcgcccctggtgtcgctgcagcgggaccagacccggcggctgcgc
gagcgggggctgccggcggtcgcgctcaacgccacggcgggagagaagcggcgaagcgag
gcgtacggcctgctgcgcggcggcgcgccggcgttcgtcttcctcgccccggaacaactc
gtccgtgacgacgtgcgcgcggtgctgcgcgaggcgccgccggtgctgctcaccgtggac
gaggcgcactgcgtctccgcctgggggcacgacttccgcccggactatctacggatcggc
ggggtgctggacgggctcccgcgccggcccgtggtggcggcgctcaccgcgacggccgcg
ccgcccgtgcgggaggagatcgtcgcgcggctcgggctccgcgatccggcgcgtttcgtg
tccgggttcgaccgcccggagatccggctcgcggtgccgggcttccacgacgccggcggc
aaggaggacgcggtcgtacggctcgtgggcgagctgcccgggtccggcctcgtgtacgcg
gcgacgcgccgggaggccgaggcgtacgcggaacggctcggggtgcccgcgtaccacgcg
gggatgcgcaagagcgcccgcgaggcggcccagcgggcgttcatggacggggccacgatc
gccgcgacgagcgcgttcggcatgggcatcgaccggccggacgtacggttcgtcgtgcac
gcctccgcgccggggtcgctggatgagtactaccaggagatcggccgggccggccgcgac
ggcgagccggccaccgcggtctgctgctaccgggccgaggacctgggcctccagcggttc
ttcgccggcggccggcccgacgaggacctcctcgcccgggtggcggaggcggccgacggg
ccggtctcacgccgggagctggccgagcgcgccgaggtctcggggcgccgcctcggcggc
gcgctgaacctgctggagtcggccggcgccgtccggctgggccggcgggtggagccggtg
cccggcgctccggcaccggccgaggcggcggccgccgcggtccaggcggccgaacggcac
cgctcgatcgagcgttcgcgcgtggagatgatgcggcgctacgcggagctgaccgactgc
cggcgccggttcctgctgcgctacttcggcgagttcacccaggacccctgcggccggtgc
gacaactgcgaggccggctggtccaccccggcggacgaggaggacgccacgtacgcgccg
ggcgagcgggtgcaccaccgggactggggccggggcacgcttctgggctacaaggacggc
cggctcaccgtcgtcttcgaccacgtcggttacaaggagctcctggaggacaccgtggcc
ggcgaggacctgctccgcccggtgcgcgactga
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