Actinoplanes sp. NBRC 14428: Asp14428_25100
Help
Entry
Asp14428_25100 CDS
T08315
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
actr
Actinoplanes sp. NBRC 14428
Pathway
actr03030
DNA replication
actr03430
Mismatch repair
actr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asp14428_25100 (dnaE_1)
03430 Mismatch repair
Asp14428_25100 (dnaE_1)
03440 Homologous recombination
Asp14428_25100 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actr03032
]
Asp14428_25100 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
actr03400
]
Asp14428_25100 (dnaE_1)
Enzymes [BR:
actr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asp14428_25100 (dnaE_1)
DNA replication proteins [BR:
actr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asp14428_25100 (dnaE_1)
DNA repair and recombination proteins [BR:
actr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asp14428_25100 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCJ51035
LinkDB
All DBs
Position
complement(2715484..2719017)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAARLKDLFAEANRLGMPAVAITDHGNMHGAYDFYTQATAAG
VTPVIGIEAYVAPESRLHKARVKWGRPEQKSDDISGNGAITHKTMWARNAQGLKNLFRLS
SRASMEGHYVKWPRMDMDIIAEHAEGIMATTGCPSGAVQTRLRLGQDDEAYKVAAQYQEI
FGKENYFLEIMDHGLEIENRVRDGLLDISRRLGIPPLVTNDSHYTHEAQAEAHDVLLCVQ
TGSNIADPNRFRFDGGGYFIKSADQMRAVDSSDAWLEGCRNTLLVAEKVDTEGMFTFKNL
MPRFPVPEGHTEESWFRHEAYEGLKRRFPGGIPETHVKQAEYELGVISQMGFPSYFLVVA
DFIQWSKRNGIAVGPGRGSAAGSLIAYAMGITDLDPLPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIRYVTDRWGEDKVAQIATFGTIKAKAAIKDSARVLGYPFAVGDRITKALPP
DVMGKGIPLSGIFDKDHKRYSEAGEVRALYEQDPDVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIDHIPLMRRATDGVIITQFDYPTCETLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGMEMDLLALPLDDKPAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVESHTNYALRKNKLQEITPIHPELEEPLREILEPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFKPFREGCRQHGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAGLLTSVGDDKDKMAMYLAECRRMGIQVLPPDVNESA
GPFTPVGKDIRFGLAAIRNVGHNVVEAVARCREEKGKYQDFYDFLSKVDAVACNKKTIES
LIKAGAFDSMGHSRKGLLAVHAEAIDAYADVKRNEAAGQFDLFGAFGDEAGGASATVAMP
TITDGEWDKRDKLAFEREMLGLYVSDHPLAGLEQVLANAADTTIAALNEEGSVPDGQVVT
LAGILTGVQRRITKQGRPWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDTPRIMAMDMSMPDVTHNPDTKPITLTMPITRCTPPLVSELKEILVSHPGDSEVHVH
LLNGSRKTVMRLGGFKVAATPALRADLKMILGPSAVA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactcgttcgtgcacctccatgtgcacaccgagtattcgatgctcgacggagcc
gcccggctgaaggacctgttcgccgaggcgaaccggctcgggatgccggccgtggcgatc
accgaccacggcaacatgcacggggcgtacgacttctacacgcaggccacggcggccggc
gtcaccccggtgatcggcatcgaggcgtacgtggcgcccgagtcgcggttgcacaaggcg
cgcgtcaagtggggccgcccggagcagaagtccgacgacatctcgggtaacggcgcgatc
acccacaagacgatgtgggcccgcaacgcgcaggggctcaagaacctgttccggctcagc
agccgggcgtccatggagggccactacgtcaagtggccgcggatggacatggacatcatc
gccgagcacgccgagggcatcatggcgacgacgggctgcccgtccggcgccgtgcagacc
cggctgcggctggggcaggacgacgaggcgtacaaggtcgcggcgcagtatcaggagatc
ttcggcaaggagaactacttcctggagatcatggaccacggcctcgagatcgagaacagg
gtccgcgacggcctgctcgacatcagccgccggctcggcatcccgccgctggtcaccaac
gactcgcactacacccacgaggcccaggccgaggcgcacgacgtgctgctgtgcgtgcag
accggcagcaacatcgccgaccccaaccggttccgcttcgacggcggcggctacttcatc
aagtccgccgaccagatgcgcgcggtcgactcgtccgacgcctggctggaggggtgccgc
aacacgctcctggtggccgagaaggtcgacaccgagggcatgttcaccttcaagaacctg
atgccccggttccccgtacccgaggggcacaccgaggagtcgtggttccgccacgaggcg
tacgagggcctcaagcgccgctttccgggcgggatcccggagacgcacgtcaagcaggcg
gagtacgagctcggtgtcatcagccagatgggctttccgtcctacttcctcgtggtcgcg
gacttcatccagtggtcgaagcgcaacggcatcgcggtcggcccgggccgcggctcggcg
gccggctcgctgatcgcgtacgcgatgggcatcaccgacctcgaccccctgccgcacggc
ctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatcgac
ttcgacgagcgccggcgcggcgaggtcatccgctacgtcaccgaccgctggggcgaggac
aaggtcgcgcagatcgccaccttcggcacgatcaaggcgaaggcggccatcaaggactcg
gcgcgggtgctcggctacccgttcgcggtgggcgaccggatcaccaaggcgctgccgccg
gacgtgatgggcaagggcatccccctgtccggcatcttcgacaaggaccacaagcggtac
agcgaggccggcgaggtccgcgcgctgtacgagcaggatcccgacgtcaagaaggtgatc
gacaccgcgcgcggcatcgagggcctgatccggcagaccggcgtgcacgccgccggcgtc
atcatgagcgccgagccgatcatcgaccacatcccgctcatgcgccgcgccaccgacggt
gtgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaagatggac
ttcctcggcctgcggaacctgacgatcatcgacgacgccgtgaagaacatccagctcaac
cacggcatggagatggacctgctggccctgccgctggacgacaagcccgcctacgagctg
ctggcccgcggcgacacgctgggcgtcttccagctcgacggcgggccgatgcggtcgctg
ctgcggctcatgaagcccgacaacttcgaggacatctccgcggtgctggcgctctaccgg
cccggcccgatgggtgtcgaatcgcacaccaactacgcgctgcgcaagaacaagctgcag
gagatcacgccgatccacccggagctcgaggagccgctgcgcgagatcctggagcccacg
tacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
accctcggccaggccgacctgctgcgccgcgcgatgggcaagaagaagaaggagatcctc
gacaaggagttcaagcccttccgcgagggctgccggcagcacggctacagcgacgaggcc
atccaggcggtgtgggacgtcctcgtgccgttcgccggctacgccttcaacaaggcgcac
tcggccgcgtacggcctggtgtcgtactggacggcgtacctcaaggcgcactacccggcg
gagtacatggccgggctgctcaccagcgtcggcgacgacaaggacaagatggcgatgtac
ctggccgagtgccggcgcatgggcatccaggtcctgccgcccgacgtcaacgagtccgcc
gggcccttcaccccggtcggcaaggacatccgcttcggcctcgccgcgatccgcaacgtc
gggcacaacgtggtcgaggcggtcgcccgctgccgcgaggagaagggcaagtatcaggac
ttctacgacttcctgtccaaggtggacgccgtcgcctgcaacaagaagacgatcgaatcc
ctgatcaaggccggcgcgttcgactcgatggggcacagccgcaaggggctgctggccgtg
cacgccgaggcgatcgacgcgtacgccgacgtcaagcgcaacgaggccgcgggccagttc
gacctgttcggtgccttcggcgacgaggccgggggcgcctcggcgaccgtggcgatgccg
accatcaccgacggcgagtgggacaagcgcgacaagctggccttcgagcgcgagatgctc
ggcctctacgtctccgaccacccgctcgcgggcctggagcaggtcctcgcgaacgccgcc
gacaccacgatcgcggcgctgaacgaggagggctcggtcccggacgggcaggtcgtcacc
ctcgccggcatcctcaccggggtccagcggcggatcaccaagcagggccggccctgggcg
tcggccacgctggaggacctggccggcggggtggagacgctgttcttccccaacacgtac
gaggtgatcgggcagtacatcgccgaggacgcgatcgtggtggtgaagggccgggtcgac
cgccgcgacgacaccccgcggatcatggcgatggacatgtcgatgccggacgtgacccac
aacccggacacgaagccgatcacgctgaccatgccgatcacccggtgcaccccgccgctg
gtctccgagctcaaggagatcctggtcagccaccccggcgacagcgaggtgcacgtccac
ctgctcaacggcagccgcaagacggtgatgcggctgggcggcttcaaggtggcggccacc
cccgcgctgcgcgccgacctgaagatgatcctcggtccgtcggcggtcgcctga
DBGET
integrated database retrieval system
