Actinoplanes sp. NBRC 14428: Asp14428_42550
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Entry
Asp14428_42550 CDS
T08315
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
actr
Actinoplanes sp. NBRC 14428
Pathway
actr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Asp14428_42550
09124 Replication and repair
03420 Nucleotide excision repair
Asp14428_42550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actr03021
]
Asp14428_42550
03400 DNA repair and recombination proteins [BR:
actr03400
]
Asp14428_42550
Enzymes [BR:
actr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asp14428_42550
Transcription machinery [BR:
actr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Asp14428_42550
DNA repair and recombination proteins [BR:
actr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Asp14428_42550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCJ52780
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All DBs
Position
4563559..4565220
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AA seq
553 aa
AA seq
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MSGGPLIVQSDKTLLLEVDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAESVVDSLIKFSRYPVPHALLVDVADTMDRYGRLQLANDPTHGLVLRGLDKIVLVEVA
KSKKLAGMLGARIDDETIVVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHEIDLAEDGW
TLRSYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMATAKATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGLVIYDEV
HLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECTEVRVTLTDAERMTYAVTDAEERYRVAATARTKLPVVRALVEKHAGEQTLVIGGYID
QLHELGEYLDAPIVQGSTTNKERERLFDEFRAGTLRTLVISKVGNFSIDLPEAAVAIQVS
GTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGYAYTIVD
ADDVLGPPLPQID
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcggacccctgatcgtgcagtccgacaagaccctgttgctggaggtcgaccac
cccgacgcccaggcctgccggatggccatcgcgccgttcgcggagctggagcgttcaccc
gagcacgtgcacacctaccggctgacgccgctcgggctgtggaacgcccgcgccgccggc
cacgacgccgagagcgtcgtggactctctgatcaagttctcccgctacccggtgccgcac
gcgctgctggtcgacgtcgccgacaccatggatcggtacggccgcctccagctcgccaac
gacccgacgcacgggctcgtcctgcgcgggctcgacaagatcgtgctggtggaggtggcg
aagagcaagaagctcgcgggcatgctcggcgcccgcatcgacgacgagacgatcgtggtg
cacccctccgagcgtggccggctcaagcaggcactgctcaagctgggctggcccgccgag
gacctcgccgggtacgtggacggcgaggcacacgagatcgacctggcggaggacggctgg
acgctgcggtcgtaccagcaggaggcggtcgacggcttctgggccggcggttccggcgtg
gtggtgctgccctgcggcgccggcaagacgctggtcggggccgcggcgatggccaccgcg
aaggcgacgacgctcatcctggtgaccaacacggtcgcgggccggcagtggaagcgcgag
ctggtcgcccgcacgtcgctgaccgaggacgagatcggcgagtattccggcgagcgcaag
gagatccgcccggtcaccatcgcgacgtaccaggtgctgacgtcccggcgcggcggcgcg
ttcacccacctggacctgttcggcgcccgcgactggggcctggtcatctacgacgaggtg
cacctgctccccgcgccgatcttccgtttcaccgcggacctgcaggcccgccgccggctc
ggtctgaccgcgacgctggtgcgcgaggacggccgcgagggcgacgtcttctcgctcatc
ggcccgaagcgctacgacgcgccgtggaaggacatcgaggcgcagggctggatcgccccg
gccgagtgcaccgaggtccgggtcaccctcacggacgccgagcggatgacgtacgccgtg
accgacgccgaggagcgctaccgggtcgcggccaccgcccgcaccaagctgcccgtggtc
cgcgcgctcgtggagaagcacgccggcgagcagacgctggtcatcggcggctacatcgac
cagctgcacgagctgggcgaatacctcgacgccccgatcgtccagggctccacgaccaac
aaggaacgcgagcggctgttcgacgagttccgggccggcacgctgcgcaccctggtcatc
tcgaaggtcggcaacttcagcatcgacctgccggaggcggcggtggcgatccaggtgtcg
ggcacgttcggctcccgccaggaggaggcccagcgcctgggtcgcgtcctgcgccccaag
gcggacggtcgccaggcccacttctacacggtggtctcccgcgacacgatcgacaccgag
tacgcggcgcaccgccagcggttcctggcggagcagggctacgcgtacacgatcgtcgac
gcggacgacgtgctcggcccgcccctcccccagatcgactga
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