Actinoplanes sp. NBRC 14428: Asp14428_43090
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Entry
Asp14428_43090 CDS
T08315
Symbol
topA_2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actr
Actinoplanes sp. NBRC 14428
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actr03032
]
Asp14428_43090 (topA_2)
03400 DNA repair and recombination proteins [BR:
actr03400
]
Asp14428_43090 (topA_2)
Enzymes [BR:
actr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Asp14428_43090 (topA_2)
DNA replication proteins [BR:
actr03032
]
Prokaryotic type
DNA Topoisomerases
Asp14428_43090 (topA_2)
DNA repair and recombination proteins [BR:
actr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Asp14428_43090 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
Toprim_4
Toprim_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BCJ52834
LinkDB
All DBs
Position
complement(4622061..4624868)
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AA seq
935 aa
AA seq
DB search
MPSNARTTRLVIVESPSKAKTIAGYLGPDYFVEASFGHVRDLPKNADEVPEKYKGESWAR
LGVDVDNGFHPLYVVSADRRQQINKLKQLAKEVDEIFLATDEDREGEAIAWHLVETIKPK
VPVRRMVFHEITRPAIQAAVANPREIDKDLVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRIVVERERQRMAFRTAEYWDINAQLAVQGKVEGTRSFSATLIALNGDRVA
TGKDFEPTTGRLKPGAAVVHLDGDGARGLAARLEDRPFQVTRVEEKPYRRRPYAPFITST
LQQEAARKLRMSSAQTMRVAQRLYENGYITYMRTDSVNLSETAIAAARRQIAELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDTFRAPGELANELSGDEFRLYELIWRRTVASQMTD
AVGNSISVRIRAVSTTQEEADFAATGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTAEELAAVGHHTSPPARYTEASLVKALEELGIGRPSTYSSIMQTIQDRGYVEKRG
QALIPTFIAFAVIGLMEQHYPRLVDYNFTAAMENDLDGIAGGENASLDFLSAFYFGSQTA
DPDGSIAQAGGLRKLVTDNLSAIDARAINSIPLFKDDEGRQIVVRVGRYGPYLQRQVPDS
TEEAANDRVSIPDGVAPDELTPEKVKELYLGGGGEKNLGEDPATGESVLLKSGRFGPYVE
SGERRSSLFRTQSPETLTLDQAIQLLTLPRVVGKDPEGAEIVAKNGKFGPYVQRGTDSRS
LQTEDQLFTITLDEALALLAAPKTRQRGAAKPPLREMGPDPVTEKPMIIKEGRFGPYVTD
GEYNASLRRGQTPEELTVEQASEMLAEKRAKGPAPKKKAAAKKAPAKAADGAEPAKKAAK
KAPAKKAAARKATTTAAKKAAPKKAAPAKATASAE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaacgccaggacgacccgtctggtcatcgtcgagtccccgtcgaaggccaag
acgatcgccggctacctggggcccgactatttcgtcgaggcctccttcggtcatgtccgc
gacctgccgaagaacgccgacgaggtgcccgagaagtacaagggcgagtcgtgggcgcgg
ctcggcgtcgacgtcgacaacggcttccacccgctctacgtcgtctccgccgaccgccgc
cagcagatcaacaagctgaagcagctggccaaggaggtcgacgagatcttcctggccacg
gatgaggaccgcgagggcgaggccatcgcctggcacctggtcgagacgatcaagcccaag
gttcccgtacgccggatggtgttccacgagatcacccgcccggccatccaggcggccgtg
gcgaacccgcgcgagatcgacaaggacctggtcgacgcgcaggaggcccgccgcatcctg
gaccggctgtacggctacgaggtcagcccggtgctgtggaagaaggtcatgccgcggctc
tcggcgggccgggtccagtccgtggccacccggatcgtggtcgagcgcgagcgccagcgg
atggcgttccgcacggccgagtactgggacatcaacgcccagctcgccgtccagggcaag
gtcgagggcacccgctcgttctcggcgacgctgatcgccctcaacggcgaccgcgtcgcg
accggcaaggacttcgagcccaccaccggccggctcaagcccggcgccgcggtcgtgcac
ctcgacggcgacggcgcccgcgggctcgccgcccggctcgaggatcgcccgttccaggtc
acccgggtcgaggagaagccgtaccggcgccggccgtacgcgccgttcatcacctccacg
ctgcagcaggaggccgcgcgcaagctgcgcatgtcgtcggcgcagaccatgcgggtcgcc
cagcggctgtacgagaacggttacatcacgtacatgcgtacggactcggtgaacctgtcg
gagacggccatcgcggccgcccgccggcagatcgccgagctgtacggcgagcgcagcgtc
ccgccggagccgcgccgctacaccggcaaggtcaagaacgcccaggaggcgcacgaggcg
atccggcccgccggtgacaccttccgcgcccccggtgagctggccaacgagctctccggc
gacgagttccggctctacgagctgatctggcggcgtacggtcgcctcccagatgaccgac
gcggtcggcaactcgatctcggtccgcatccgcgccgtctccaccacccaggaggaggcg
gacttcgccgcgaccggcaagaccatcaccgaccccggcttcctgcgcgcctacgtcgag
tcgtccgacgacgagaacgccgaggccgaggacgccgagcgccgcctgcccaacctggtc
aaggaccagccgctgaccgccgaggagctcgccgcggtcggccaccacaccagcccgccg
gcccgctacaccgaggcgtcgctggtcaaggccctggaggagctgggcatcggccgcccg
tcgacctactcgtcgatcatgcagaccatccaggaccgcgggtacgtggagaagcgcggc
caggcgctgatccccaccttcatcgcgttcgcggtgatcggcctgatggagcagcactac
ccccgcctggtcgactacaacttcaccgccgcgatggagaacgacctcgacggcatcgcc
ggcggcgagaacgcctcgctggacttcctcagcgcgttctacttcggcagccagaccgcc
gacccggacggctcgatcgcccaggccggcgggctgcgcaagctggtcaccgacaacctc
agcgccatcgacgcgcgggcgatcaactcgatcccgctgttcaaggacgacgagggccgg
cagatcgtggtgcgcgtcggccgctacgggccgtacctgcagcgccaggtcccggacagc
accgaggaggcggcgaacgaccgcgtctccatccccgacggcgtcgcccccgacgagctg
accccggagaaggtcaaggagctgtacctcggcggcggaggcgagaagaacctcggcgag
gacccggccacgggcgagtcggtgctgctcaagtccggccgcttcggcccgtacgtggag
agcggggagcgccgctcgtcgctgttccgcacccagtcgccggagaccctgaccctcgac
caggcgatccagctgctcaccctgccccgcgtggtcggcaaggaccccgagggcgcggag
atcgtcgccaagaacggcaagttcggcccgtacgtccagcgcggcaccgactcccgctcg
ctgcagaccgaggaccagctcttcacgatcaccctcgacgaggccctcgccctcctggcc
gccccgaagacccgccagcgcggcgccgccaagcccccgctgcgcgagatgggccccgac
ccggtcaccgagaagccgatgatcatcaaggagggccgcttcggcccgtacgtcaccgac
ggcgagtacaacgcctccctgcgccgcggccagacccccgaggaactgaccgtcgagcag
gcctcggagatgctcgccgagaagcgcgccaagggcccggccccgaagaagaaggccgcc
gcgaagaaggccccggccaaggccgccgacggcgcggaaccggcgaagaaggccgccaag
aaggccccggccaagaaggccgccgcccgcaaggcaaccaccaccgcggcgaagaaggcc
gccccgaagaaggcagcccccgccaaggccacagccagcgccgagtaa
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