Actinoplanes sp. NBRC 14428: Asp14428_57740
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Entry
Asp14428_57740 CDS
T08315
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actr
Actinoplanes sp. NBRC 14428
Pathway
actr03420
Nucleotide excision repair
actr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asp14428_57740
03430 Mismatch repair
Asp14428_57740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actr03400
]
Asp14428_57740
Enzymes [BR:
actr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asp14428_57740
DNA repair and recombination proteins [BR:
actr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asp14428_57740
MMR (mismatch excision repair)
Other MMR factors
Asp14428_57740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Complex1_LYR_1
Motif
Other DBs
NCBI-ProteinID:
BCJ54299
LinkDB
All DBs
Position
6176728..6178869
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AA seq
713 aa
AA seq
DB search
MTAERVLTGLDPDQRRAVTAPAGPVCILAGAGTGKTRAITHRIAYRTLSGEISPRHVLAV
TFTARAAAEMRARLTELGAGRVQARTFHAAALRQVRYFAPRLLEGRGMPELVESKARLVG
LAAARAGVRADRTAARDLAGEIEWAKSSLVEPGEYVVAATKALREPPYEAAKVAEIFAAY
ESLKRRQGVIDFEDMLRAAVWGIEEHQDVAEQVRSQYRHFVVDEYQDVNPLQQRLLDAWL
GGRDDLTVVGDASQTIYSFTGATSSYLVDFPRQRREAVVVRLVRDYRSTPQVVGLANAVI
QQARGTEAKLRLELVGQRPPGAEPDLKIFPDEPAEAVAVARRCRELIASGTPASEIAVLF
RTNAQSETYEKSLAEAEVPYVVRGAERFFERTEVRQAMIALRAAVRSTPGETPLVQAVVD
GLSATGWARDQPPPGGAQREQWEALAAIVALAEEYERSPAVLPIGQAGAVQRDVSLSAFN
DELARRAEQQHAPTVEGVTLASLHAAKGLEWDAVFLVGLADGTLPTTYAKTPEQLEEERR
LLYVGVTRARQWLWLSYGQSRSPGGRTRRPCRFLPQLGETQHRTFEKAGAGSRKPVNRRT
QVISCRVCGATLLAGADRKLGRCPTCPSDLDEELFERLQTWRAHAAAEQKVPAYVVFTDA
TIVAIAERRPSTPPELLAIAGIGPRKLAQYGAAVFALVGGASPAEAASENFEN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcggaacgtgttctcaccgggctcgaccccgaccagcgcagggcggtgaccgcc
cccgcggggcccgtctgcatcctggccggagccggcaccggtaagacccgtgcgattacc
caccgcatcgcatatcgaacactgtcgggcgaaatcagtccccggcacgtcctcgccgtc
accttcaccgcgcgcgccgccgccgagatgcgcgcccgcctcaccgagctcggcgccggc
cgggtccaggcccgcacgttccacgccgccgcgctgcgccaggtccgctacttcgcgccc
cggctgctcgaggggcggggcatgccggagctggtggagagcaaggcgaggctggtgggg
ctcgccgccgcgcgggccggggtgcgcgccgaccgtacggccgcccgcgacctcgccggc
gagatcgaatgggccaagtcgtcgctcgtcgagcccggggagtacgtcgtcgccgcgacc
aaggcgctgcgcgagccgccgtacgaggccgccaaggtcgccgagatcttcgccgcgtac
gagtcgctcaagcgccgccagggcgtgatcgacttcgaggacatgctgcgcgccgccgtc
tggggcatcgaggagcaccaggacgtcgccgagcaggtccgctcccagtacaggcacttc
gtcgtggacgagtatcaggacgtcaacccgttgcagcagcgcctgctcgacgcctggctg
ggcggtcgcgacgacctcaccgtggtcggcgacgccagccagaccatctactccttcacc
ggggcgacctcgtcctacctcgtcgacttcccccggcagcgccgcgaggccgtggtggtg
cgcctcgtccgcgactaccgctccaccccgcaggtcgtcggcctcgccaacgcggtgatc
cagcaggcccgcggcaccgaggccaagctgcggctcgaactcgtcggccagcgcccgccc
ggcgccgagcccgacctcaagatcttcccggacgagccggcggaggccgtcgcggtggcc
cggcgctgccgcgagctgatcgcctccggcaccccggcgagcgagatcgcggtgctgttc
cgcaccaacgcccagtccgagacctacgagaaatcgctcgccgaggccgaggtgccgtac
gtcgtccgtggcgccgaacggttcttcgaacgcaccgaggtgcgccaggcgatgatcgcg
ctgcgggcggccgtgcgttccaccccgggcgagacgccgctggtccaggccgtcgtggac
ggcctctcggcgaccggctgggcccgggaccagcccccgcccggcggggcgcagcgcgag
cagtgggaggcgctcgcggcgatcgtcgccctcgccgaggagtacgagcgcagccccgcc
gtgctgcccatcggccaggccggggcggtgcagcgcgacgtgtccctgtccgccttcaac
gacgagctggcccggcgcgccgagcagcagcacgccccgacggtcgagggcgtcacgctg
gcctcgctgcacgccgccaaggggctcgaatgggacgcggtgttcctggtggggctggcg
gacgggacgctgcccaccacgtacgcgaagacacccgagcagctcgaggaggagcgccgc
ctgctgtacgtcggtgtgacccgggcgcggcagtggctctggctctcgtacggccagtcc
cgctcgcccggtggacgcacccggcgcccgtgccgcttcctgccccagctcggcgagacc
cagcaccgcacgttcgagaaggccggggcgggaagtcggaaacccgtcaatcggcgtacc
caggtcatttcctgccgggtctgcggcgccaccctcctggccggcgcggaccgcaagctc
ggccgctgccccacctgcccgtccgacctcgacgaggaactgttcgagcggctgcagacc
tggcgggcgcacgccgcggcggagcagaaagtccctgcgtacgtggtgttcaccgacgcc
acgatcgtggccatcgcggaacgccggccgagcaccccgccggagctgctggccatcgcc
ggaatcggcccccgcaaactcgcccagtacggcgccgcggtgttcgctctggtcgggggc
gcgagcccggccgaggccgcctcagaaaactttgaaaactag
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