KEGG   Actinoplanes sp. NBRC 14428: Asp14428_61140
Entry
Asp14428_61140    CDS       T08315                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
actr  Actinoplanes sp. NBRC 14428
Brite
KEGG Orthology (KO) [BR:actr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:actr03032]
    Asp14428_61140
   03036 Chromosome and associated proteins [BR:actr03036]
    Asp14428_61140
   03400 DNA repair and recombination proteins [BR:actr03400]
    Asp14428_61140
DNA replication proteins [BR:actr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Asp14428_61140
Chromosome and associated proteins [BR:actr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Asp14428_61140
DNA repair and recombination proteins [BR:actr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Asp14428_61140
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-HIG
Other DBs
NCBI-ProteinID: BCJ54639
LinkDB
Position
6533979..6534860
AA seq 293 aa
MNKAELIEALAARLGDRKTATAALDAVISEVQTAVTKGDRVAITGFGVFEKRARNARTAR
NPRTGEPVKVKKTSVPAFKPGTGFREMVASGKVAKATAAKKTTAAAKSTATKATPAKSTA
TSAAKKTTAAKATPAKSTATKTAAAKKTAATKATATKATATKATATKTTAAKSAPAKTTA
AKKTATTAKATPAAKSTATKAAATKAAATKATATKAAATKATPAKSTATKTATAKKTAAT
KSAPAKKTATKSAAATKSAPAKKATARKTTAATKATPAAKATTARTAAPRKTR
NT seq 882 nt   +upstreamnt  +downstreamnt
gtgaacaaggccgagctcatcgaggcgctcgccgcccgactgggggaccggaaaacggcg
acagcggcgctggatgcggtcatcagcgaggtgcagaccgccgtcaccaagggcgaccgc
gttgccatcaccggtttcggtgtcttcgagaagcgggcgcgaaatgcgcgcaccgcgcgg
aatccgcgcaccggcgaaccagtcaaggtgaagaaaacgtccgtccccgccttcaagccc
ggcacgggtttccgggagatggtcgcgagcggcaaggtggccaaggccaccgccgccaag
aagaccaccgcggcggcgaagtccactgccaccaaggccactccggccaagtcgacggcg
acgtcggcggcgaagaagaccacggcggcgaaggccactccggccaagtcgaccgcgacg
aagacggcggcggccaagaagaccgcggccaccaaggcgacggcaacgaaggcgaccgcc
accaaggccacggcgaccaagacgacggcggcgaagtcggcgccggcgaagacgaccgcg
gccaagaagacggccaccacggccaaggccaccccggcggcgaagtcgaccgccacgaag
gccgcggcgaccaaggccgcggcgaccaaggccacggcgaccaaggccgcggcgacgaag
gccaccccggccaagtcgaccgcgaccaagaccgcgacggccaagaagacggcggccacc
aagtccgcgccggcgaagaagaccgccaccaagtcggcggctgctaccaagtcggcgccg
gccaagaaggcgaccgcccgcaagaccacggcggccaccaaggcgaccccggccgccaag
gccaccacggcgcgcaccgccgcgccgcgcaagacgcgctga

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