Actinoplanes sp. NBRC 14428: Asp14428_61490
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Entry
Asp14428_61490 CDS
T08315
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
actr
Actinoplanes sp. NBRC 14428
Pathway
actr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Asp14428_61490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actr03019
]
Asp14428_61490
03009 Ribosome biogenesis [BR:
actr03009
]
Asp14428_61490
03036 Chromosome and associated proteins [BR:
actr03036
]
Asp14428_61490
Enzymes [BR:
actr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Asp14428_61490
Messenger RNA biogenesis [BR:
actr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Asp14428_61490
Ribosome biogenesis [BR:
actr03009
]
Eukaryotic type
90S particles
RNase
Asp14428_61490
Prokaryotic type
rRNA processing factors
Asp14428_61490
Chromosome and associated proteins [BR:
actr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Asp14428_61490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BCJ54674
LinkDB
All DBs
Position
6563112..6563933
Genome browser
AA seq
273 aa
AA seq
DB search
MSSNDRRRPRPSTEPLEEAFGVPLEPDLLERALTHRSYAYENGGLPTNERLEFLGDSVLG
VVITSALFHNHPDLPEGQLAKLRASVVNMHALADVARTLGPQGLGPHLLLGKGEETTGGR
DKASILADTLEALLGAIYLEHGLDTAGEVIHRLFDPLMAESAGRGAALDWKTSLQELTAA
LGLGVPDYVIDDAGPDHAKTFTAWVVVAGERYGGSDGRSKKQAEQRAAAAAWRTLTERAE
AETPPPAVAGGGHVEDEEAGNSESTDDRSAAGR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaacgacaggcggcggccgcggccctcgaccgagccgctcgaggaggccttc
ggcgtgccgctggagcccgacctgctcgagcgggccctcacgcaccgctcgtacgcgtac
gagaacggcgggctgcccaccaacgagcgcctggagttcctgggcgactcggtgctgggc
gtggtcatcacctcggcgctgttccacaaccaccccgacctgcccgagggccagctcgcc
aagctgcgcgccagcgtggtcaacatgcacgcgctcgccgacgtcgcccgtacgctcggc
ccgcagggtctcggcccgcacctgctgctcggcaagggcgaggagacgaccggcggccgg
gacaaggcgagcatcctggccgacaccctggaggcgctgctcggggcgatctacctcgag
cacgggctggacaccgcgggcgaggtcatccaccggctgttcgacccgctgatggccgag
tcggccggccggggcgcggcgctggactggaagaccagcctgcaggagctgacggcggcg
ctcgggctgggcgtacccgattatgtgatcgacgacgccgggccggaccatgccaagacc
ttcaccgcctgggtggtcgtggccggggagcgctacggcggttccgacgggcgcagcaag
aagcaggcggagcagcgcgccgccgcggcggcgtggcggaccctgaccgagcgcgccgag
gccgagaccccgccgcccgcggtagccggcggcggccacgtcgaagacgaggaagccggc
aacagcgagagcaccgacgacagaagcgccgccggccggtga
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