Actinoplanes sp. NBRC 14428: Asp14428_62730
Help
Entry
Asp14428_62730 CDS
T08315
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
actr
Actinoplanes sp. NBRC 14428
Pathway
actr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asp14428_62730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actr03019
]
Asp14428_62730 (pnp)
03016 Transfer RNA biogenesis [BR:
actr03016
]
Asp14428_62730 (pnp)
Enzymes [BR:
actr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Asp14428_62730 (pnp)
Messenger RNA biogenesis [BR:
actr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Asp14428_62730 (pnp)
Transfer RNA biogenesis [BR:
actr03016
]
Prokaryotic type
tRNA degradation factors
Asp14428_62730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_PNO1_2nd
KH_NusA_1st
fvmX5
Motif
Other DBs
NCBI-ProteinID:
BCJ54798
LinkDB
All DBs
Position
6689723..6692062
Genome browser
AA seq
779 aa
AA seq
DB search
MTEQKALGTETRTAVIDNGSFGTREIVFSTGRLAKQAAGSVIVQLGETTVLSATTAGKTP
KEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFTKGLRNE
VQVVETVLALDPQHPYDVVAMNGASMSTKLSGLPFSGPVGSTRIAHVEGQWVAFPTLDEL
ERATFDMVVAGRVTADGDVAIMMVEAEATPHAIKLIQAGAAAPTEEVVASGLEAAKPAIR
ELCRAQSELAEVAAKPVQDFPVFLDYQDDVYSAVVEAVREETAEALKIAAKQEREEALDR
VKAKAHELLDERFEGREKEISAAFRSVTKSEVRQRVLREQVRIDGRGPRDIRPLTAEVGI
LPRVHGSALFERGETQIMGVTTLNMLRMEQALDTLAPEKSKRYMHNYNFPPYSTGETGRV
GSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLALLSA
GVPLKAPVAGIAMGLISDEVDGKTQYVALTDILGAEDAFGDMDFKVAGTSEFVTALQLDT
KLDGIPSDVLASALQQAHDARATILGVMEQAINSPAEMSEYAPRVTSVKIPVDKIGMVIG
PKGQTINAIQDETGADISIEDDGTIYVGATNGPAAEAAVERINAIANPTLPKVGDKFLGT
VVKTAAFGAFISLLPGRDGLLHISKVGDGKRVEKVEDFLNVGDKVEVSIADIDNRGKIYL
DKVRPEGEAAPEGAAPAASDKPREERAPRGDRGDRGGEGGGEPRRRRSRPSGDRGGDRG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcagaaagctctcggcaccgaaactcgcaccgccgtcatcgacaacggatcg
ttcggcacccgcgagatcgtcttctccaccggccgcctggccaagcaggccgccggctcg
gtcatcgtccagctcggcgagaccacggtcctgtcggccaccacggccggcaagacgccc
aaggagcacttcgacttcttcccgctcacggtggacgtcgaggagcggatgtacgccgcc
ggccgcatccccggctcgttcttccgccgcgagggccgcccgagcgaggacgccatcctc
acctgccgcctgatcgaccggccgctgcgcccgtcgttcaccaagggcctgcgcaacgag
gtccaggtcgtcgagaccgtgctggcgctcgacccgcagcacccgtacgacgtcgtcgcc
atgaacggcgcctcgatgtcgacgaagctctccggcctgcccttcagcggcccggtcggc
tcgacccgcatcgcccacgtcgagggccagtgggtcgccttcccgaccctcgacgagctc
gagcgcgccaccttcgacatggtggtcgccggccgggtcacggccgacggcgacgtcgcg
atcatgatggtcgaggccgaggccaccccgcacgcgatcaagctgatccaggccggcgcc
gccgcgccgaccgaggaggtcgtcgccagcgggctcgaggccgccaagcccgccatccgc
gagctgtgccgcgcgcagagcgagctggccgaggtcgccgcgaagccggtccaggacttc
ccggtcttcctcgactaccaggacgacgtctactcggcggtcgtggaggccgtccgcgag
gagaccgccgaggccctgaagatcgccgccaagcaggagcgcgaggaggccctcgaccgg
gtcaaggccaaggcgcacgagctgctcgacgagcggttcgagggccgggagaaggagatc
agcgcggcgttccgctcggtcaccaagtccgaggtccgccagcgggtgctgcgcgagcag
gtccgcatcgacggccgcggcccgcgcgacatccgcccgctgaccgccgaggtcggcatc
ctcccgcgggtgcacggctcggcgctgttcgagcgcggcgagacccagatcatgggcgtc
accacgctgaacatgctgcgcatggagcaggcgctggacaccctcgcgcccgagaagtcc
aagcgctacatgcacaactacaacttcccgccgtactcgaccggtgagaccggccgggtg
ggctcgccgaagcgccgcgagatcggccacggcgcgctggccgagcgggccctggtgccc
gtgctgccgtcgcgcgaggagttcccgtacgcgatccgccaggtctccgaggcgctgggc
tccaacggctccacctcgatgggctcggtctgcgcctcgacgctggcgctgctcagcgcc
ggtgtgccgctgaaggcgccggtcgccggcatcgccatgggcctcatctccgacgaggtc
gacggcaagacccagtacgtcgcgctgaccgacatcctgggcgccgaggacgcgttcggc
gacatggacttcaaggtcgccggcaccagcgagttcgtcaccgcgctgcagctcgacacc
aagctcgacggcatcccgtcggacgtgctcgcgtccgcgctgcagcaggcgcacgacgcc
cgcgcgacgatcctgggcgtcatggagcaggccatcaacagccctgccgagatgtccgag
tacgcgccgcgggtcaccagcgtgaagatcccggtcgacaagatcggcatggtcatcggc
cccaagggccagacgatcaacgcgatccaggacgagaccggcgccgacatctccatcgag
gacgacggcacgatctacgtcggcgcgaccaacggcccggcggccgaggcggcggtggag
cggatcaacgccatcgccaacccgacgctgccgaaggtcggcgacaagttcctcggcacg
gtggtgaagacggccgcgttcggcgcgttcatctcgctgctgcccggccgcgacggcctg
ctgcacatctccaaggtgggcgacggcaagcgcgtcgagaaggtcgaggacttcctcaac
gtcggcgacaaggtcgaggtctcgatcgcggacatcgacaaccgcggcaagatctacctc
gacaaggtccgccccgagggcgaggccgcccccgagggcgccgcgccggccgcgtcggac
aagccccgcgaggagcgcgctccccgcggagaccgtggcgaccgcggcggcgaaggcggc
ggcgagccccgtcgtcgccggtcccggcccagcggtgaccgcggcggcgaccgcggctaa
DBGET
integrated database retrieval system
