Actinoplanes sp. SE50: ACWT_0657
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Entry
ACWT_0657 CDS
T05392
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acts
Actinoplanes sp. SE50
Pathway
acts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACWT_0657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acts03021
]
ACWT_0657
03400 DNA repair and recombination proteins [BR:
acts03400
]
ACWT_0657
Enzymes [BR:
acts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACWT_0657
Transcription machinery [BR:
acts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACWT_0657
DNA repair and recombination proteins [BR:
acts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACWT_0657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ATO80072
LinkDB
All DBs
Position
765418..769308
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDMSTIENEIFAEKRQSENSRDSEIEKRAAKLEQD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLQNMDLDAEADNLREIIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTAGAKGEGR
VFSSDAEARMAFDNGELHLQAPVKIRLRDVIGVDNGAKQAAWEAPEEWVEGEPLLVETTL
GRVIFNETLPPGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDALKEAGFHWATWSG
VTIGMGDVIGPPRKPEILARYQVEADRIDKQYQRGLMTAEERRGELIEIWTKATNEISKE
METALPQENPLWVMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPITSSYREGLTVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMAVGEREPDG
TLVVHTHAETGVHARTIADDISDPNGNLVVARGTDLNSIIVDQLVAAGVENVRVRSVLTC
ESKLGVCAACYGRSLPTGKSVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVIPDDGSEEIVYDKISKRVKLR
AHDGDHVQVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGATEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNIRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagttgcgcatcggcctggcgactgctgacgacatc
cggcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
ccggagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgttccaaggtccggcgtgagcgcatgggccacatcgagctggccgcgtcc
gtcacccacatctggtacttcaagggtgttccgagccgcttgggctatctgctcgacctg
gctcccaaggacctcgagaagatcatctacttcgcctcgtacgtggtcaccagcgtggac
gccgaggcgcgtcaccgcgacatgtcgaccatcgagaacgagatcttcgcggagaagcgg
cagtccgagaacagccgcgactcggagatcgagaagcgggccgccaagctcgagcaggac
ctcgccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtcaaggaagcc
ggcgagcgcgagatgcgccagatccgggacaaggcccagcgcgagatcgaccgcctcgac
gaggtgctcgacacgttccgcaagctcgactccaagcagctggtcaccgacgaactgctc
taccgcgagctgcgcgaccgcttcggtgagtacttcaccggtggcatgggcgccgaggcg
atcaaggccctgctgcagaacatggacctggacgccgaggcggacaacctccgggagatc
atccggtccggcaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtcgcg
gcgttcctgaacacccgcaactcgccgctcggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtccgacctg
aacgacctgtaccgccgggtgatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtcaccggcccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcggctcaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgt
ccggtcgtgtgggacgtgctggaggaggtcatcagcgagcacccggtgctgctgaaccgt
gctccgaccctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcacgtgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctc
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgccgacccaggac
atggtcatcggcctgtaccacctgacgcacctcaccgcgggtgccaagggtgagggccgg
gtgttcagctcggacgccgaggcgcggatggcgttcgacaacggcgagctgcacctgcag
gccccggtgaagatccggctgcgggacgtcatcggtgtcgacaacggggccaagcaggcc
gcgtgggaggcgccggaggagtgggtcgagggcgagccgctgctcgtcgagaccacgctc
ggccgggtcatcttcaacgagacgctgcccccgggctaccgcttcgtgaactacgagatc
cgcaagggtcagctgtcggcgatcgtcaacgacctcgccgagcgcttccccaaggtcgcc
ctggccgcgaccctggacgcgctcaaggaggccggcttccactgggccacctggtccggt
gtgacgatcggcatgggcgacgtcatcggtcccccgcgcaagccggagatcctggcccgc
taccaggtcgaggcagaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgagatctggaccaaggcgaccaacgagatctccaaggag
atggagaccgcgctgccgcaggagaacccgctctgggtgatgatcaactccggcgcccgc
ggtaacctgctccagctccggcagatcgccgcgatccgtggtctggtggccaaccccaag
ggtgagatcatcccgcggccgatcacctcgtcgtaccgcgagggtctgaccgtgctggag
tacttcatctccacccacggtgcccgtaagggtctggccgacaccgcgctgcggaccgcc
gactcgggttacctgacccggcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgcgccatcccgatggcggtcggcgagcgcgagccggacggc
accctggtcgtgcacacccacgccgagaccggcgtgcacgcccggaccatcgccgacgac
atcagcgacccgaacggcaacctggtcgtcgcccgcggtacggacctgaactcgatcatc
gtcgaccagctggtcgccgccggtgtcgagaacgtccgggtgcgcagcgtgctgacctgt
gagtcgaagctgggcgtctgcgcggcctgctacggccgttcgttgccgaccggcaagtcg
gtcgacatcggcgaggcggtcggcatcatcgcggcccagtccatcggtgagccgggtacc
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggcccgggtgccgaagggcaaggcgccgatcgcc
gacacccccggacgcatccggatcgaggacggcgagcggtcgcggaagatcatcgtgatc
ccggacgacggcagcgaggagatcgtctacgacaagatctccaagcgcgtcaagctgcgg
gcgcacgatggcgaccacgtgcaggtcggcgagaagctcaccgagggcaccatcgacccg
cacgagctgctgcgcatcatgggcccgcgcgcggtccaggtccacctgaccagtgaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgggtgacggtcatcgactccggcgcgaccgagttcctcccgggc
gtgctggtcgaccgggcgctcttcgagtcggagaaccgccgactcgtgggcgagggtggc
gagcccgccgccggtcgtccggtgctgatgggtatcaccaaggcctcgctggccaccgac
tcctggctctcggcggcctccttccaggagaccacccgggtgctgaccgacgcggcgatc
aactcgcgcagcgactcgctggtcggcctcaaggagaacgtcatcatcggcaagctcatc
ccggccggtaccggtatctccaagtaccgcaacatccgggtcgagcccaccgaggaggcc
aaggccaaggtgtactcgatgaccgggtacccggagaccgactacggcttcgggccggcc
agcgggcaggctgtgccgctggacgacttcgacttcgggtcgtaccgctaa
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