Actinoplanes sp. SE50: ACWT_1073
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Entry
ACWT_1073 CDS
T05392
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
acts
Actinoplanes sp. SE50
Pathway
acts03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACWT_1073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acts03019
]
ACWT_1073
03009 Ribosome biogenesis [BR:
acts03009
]
ACWT_1073
Messenger RNA biogenesis [BR:
acts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACWT_1073
Ribosome biogenesis [BR:
acts03009
]
Eukaryotic type
Pre-60S particles
RNases
ACWT_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATO80488
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All DBs
Position
1237586..1238161
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AA seq
191 aa
AA seq
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MWIDCEMTGLDLGKDKLIEVAALVTDPDLNVLGDGVDLVIHADDAALDAMPPVVRDMHAK
SGLTEEVRRSVLTMAEAEEQILAYVKEHVPNPRTAPLCGNSIATDRGFLARDMPALDAHL
HYRMIDVSSIKELCRRWFPRVYFGQPAKGLSHRALADIRESIRELEYYRRTVFVPPPGPD
VETAKAVAADL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgactgtgagatgaccggtctcgacctcggcaaggacaagttgatcgaggtc
gcggcgctggtcaccgatcccgatctcaatgtgctcggcgacggtgtcgacctggtcatc
cacgccgacgacgcggcgctcgacgcgatgccgccggtggtgcgcgacatgcacgccaag
tcggggctgaccgaggaggtgcgccgctcggtgctgaccatggcggaggccgaggagcag
atcctggcgtacgtcaaggagcatgtgccgaatccccgcaccgccccgctgtgcggcaat
tcgatcgccaccgaccgtggcttcctggcccgggacatgcccgcgctcgacgcccacctg
cactaccggatgatcgacgtctcctcgatcaaggagttgtgccgccgctggttcccgcgg
gtgtatttcggtcagccggccaagggcctgtcgcaccgcgcgctcgccgacatccgggag
agcatccgcgagctggagtattaccgccgcaccgtcttcgtcccgccgcccggcccggac
gtggagaccgccaaggcggtcgccgccgacctctga
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