Actinoplanes sp. SE50: ACWT_2134
Help
Entry
ACWT_2134 CDS
T05392
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acts03021
]
ACWT_2134
Transcription machinery [BR:
acts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACWT_2134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
STAS_2
STAS
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ATO81549
LinkDB
All DBs
Position
2427050..2428207
Genome browser
AA seq
385 aa
AA seq
DB search
MPYQREVLVAPQREDYDEIALRYADACATADSARAERLREDMIRAVLPMAERLARRYRGG
SEPYADLVQVARVGLVKAVNRYDPERGSFTAYAVNTIRGELKRHFRDHAWAVHVPRRMQE
ALLELTCLENELTRELHRRPTDAELAGQVGVPADEISRIRSAGSAFRPVSLSTPIGEGDL
LLGDTLGNPDGRLEDAADRLTVTELLDYLPSRERRIVHATFYERRTQTEIAAGLGISQMH
VSRLLARALSWLRAGLLTDQVPRWPVTGDAPEELFALHTRLPARGELQISVVGEVDRDNA
DRLRVALLELIRHQPACARVTLELGEVPLLDAAALRVLRSVYEAAQARHVRVTATGASAF
LRRLAVIAGLGSMLADNTAEDLSRR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccaacgagaggttcttgttgcccctcagcgggaggactacgacgagatcgcc
ctgcgctacgccgacgcgtgtgccacggccgacagcgctcgggcggaacggttgcgcgag
gacatgatccgcgcggtgctgccgatggcggaacggctggcccgccgctaccggggcggt
tccgagccgtacgcggatctggttcaggtggctcgggtcggcctggtcaaggcggtgaac
cggtacgaccccgagcgtggctcgttcaccgcctacgccgtcaacacgatccgcggtgag
ctcaagcgtcacttccgcgaccacgcctgggcggtgcatgtgccccgccgcatgcaggag
gcgctgctcgagctgacgtgcctggagaacgagctgacccgggaattgcaccggcgtccc
accgatgccgaactggccgggcaggtgggcgtaccggccgatgagatctcgcggatccgg
agcgccggcagcgcgttccggccggtgtcgctgagcaccccgatcggcgaaggggatctg
ctgctgggcgacaccctgggcaatcccgacggcaggctcgaggacgccgcggaccggctc
actgtcaccgaactgctcgactatctgcccagccgggaacgccggatcgtgcacgccact
ttctacgagcgccggacgcagaccgagatcgccgcggggctcggaatctcccagatgcat
gtgtcgcggctgctggcccgcgcgctgtcgtggctgcgtgcgggtctgctgaccgatcag
gtgccgcgctggccggtgaccggcgacgcgccggaagaactgttcgccctgcacacccgg
ctgccggcccgcggtgagctgcagatcagtgtcgtcggcgaggtcgaccgggacaacgcc
gaccggctgcgggtggcgctgctggagttgatccgccaccagccggcctgtgcccgggtc
acgctggaactcggggaggtgccgctgctggacgcggccgccctgcgagtgctgcgatcg
gtgtacgaggcggcccaggcacgccacgtcagggtgaccgctacgggtgcgagtgccttc
ctgcgcaggctggctgtcatcgccgggctcggctcgatgctggccgacaacacggccgag
gatttgagccggcgatga
DBGET
integrated database retrieval system
