Actinoplanes sp. SE50: ACWT_2211
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Entry
ACWT_2211 CDS
T05392
Name
(GenBank) Collagen alpha-4(VI) chain
Organism
acts
Actinoplanes sp. SE50
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactonase
YNCE
Cytochrom_D1
SGL
DUF5074
Arylesterase
Motif
Other DBs
NCBI-ProteinID:
ATO81626
LinkDB
All DBs
Position
complement(2518025..2523433)
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AA seq
1802 aa
AA seq
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MSGRRLAVVVTVEHHDDPVLRRYSVPSADVRGLAAVLADPGLGGFDVEFLQDPETWDVYQ
RLQAVADNRTPDDCLLVYFRGILLSGPGGGLYLATPDTVMQRPADTAVDVTRLDALIHRS
HAGQVVIILDGRTGGPVDAGAYFPAAHAADNRSRVLLTADARPEPPTFAGLLADGLRGGA
ADRNRDGYTGIDEVIDHLRERDPSVRHWTFGTGRQPYLSKVRKPGSDQMALIAELAAAAA
GPDLPQAAQARTTLSRLATGSDRVAAAATAALRRTSLRVPDPQITFGQTLPGGPAQTARV
PLTAPPLVATSTVTTTGDGLQAVLDGSHLQVTWRPGRSSLTGSVTIDGPTGVAHLSVTGE
VTPETSALPKPGTAPQPGPALPGAAPHPGATSQPGATSQPGAASQPGAASQPGAASQPGA
ASQPGAASQPGAALHPGAVSHPGATAESGSGAQSGAAARSGQSDATGQGGTALEPTLPAP
PPRWAGGNGVRPTSGAPAGQPPFSAPVDPWPDAPTSTTPPPARPADPWPTAPAWLPDASP
HHRVVGPPSAPGSHDQVTSPLPTSGAPDQNTDRAPASGAHDQTTSALTSPPAAHPQSRPQ
ISQGPWSGAPSRPAAPWSTGTTEDPSHPSGTWWAQSPGAGQQPERTSPTVPTTRPSAQPP
SQRRPDHDATPTRTPEPASPLSASAPSPAATPPAEIHPAGIHPAEIWPGSPAEPSTQTES
HVPWPGSLTAMQADTTPAPVADALPSTLEAPIHPPGPSTSRPESPAPSPAPAPVPGPTPS
SVPAPVWSDVTPAWSDAASTSPSDSGVDQVAPLTDPVTPNHPAPEESGPPQAEDDVIDHR
TESPADSSAREATPPSDPEALRLSSGAETQAWPPDPAADPDPVDNPAEVDSPSAPDSPAG
LDSRAAVDSRAAVDSPAAVDSPAAVDSPAAVDDRSTPRAADIADTPSTPPAPAEQHTTGN
RSAAVAAAAAGGFVGAWLNTQSSPSDPPVQEQPIAPDQNPGTLPHSRQEQPASKGAAPAT
PPTANGDTPAAPDPVVPDPATPGSPVTPTLSPAGPWPGDQPSGRGAFYAQQPGFGWQQAP
ANPSDSAAPPESVGPADSADSATPAEHWTTAAGQAQQSSDPAGPWPGTSDPAGPWPGTAV
PGQSWPSRGTPHEQSDRTTVSWEAGSAAAAAGGWPRSTDPATDPAVPHRPESPVPTGPQW
PGQAAAADQATPPEPPTWPPPPHPSAAPSTAPASGVGPGGSSSRVSWIGPNDWPSTADTP
GHGPTGAPGHGPIGAPGPGRAGIPGAATAGAAGPGQAGIPGAGIAGAAGPGQAGIPGAGI
AGAAGPGQAGIPGAGIAGAAGRGPAGPGSPPAPPSGTGPADAPGVSGPHSGSETTAWGGV
QSPSGWQQAQTAAPANPAWPTSPAGWPAAPGWQQPGVASPAAGGDPAYANNPPQEKRRLR
VAGILVLALLLAAGAYLGIRYAAGRGREQAAPPPTVAQTLTGTPPSGQATGPATTTPAPA
SLGTPVVLNTIKGVGREPEGVVVSSDSKTLFVADQGAKQVFVVDAASGKAQPVDVPNTPR
FLTLSKDGAKLYVSMFENDFSANGLAVIDTAKRSVITSVKTGPRPFQPAVAADGRVWLPI
HNGARVEIYDGTTLARLSQISVPPNPHWIAFTPDGSRAFTSDHESSRVSVVDTASLAVLN
TITVGRSPHSLAVTPDGGTVVVTNYDVDTVETYDTRTLKLTQRYQVGKLPQAVLVSADGA
HAYVVNEGSDTLSVLDLPARKVAATIPVGDSPRVVGLSPDGLRLYVTAGRDGAITVLKAA
DG
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcgacgtctggcggtcgtggtgacggtcgaacaccacgacgatcccgtcctg
cgccggtattcggtgccgtcagcggacgtgcggggtctcgccgccgtgctggccgatccc
ggtctcggcggcttcgacgtggagttcctgcaggacccggagacgtgggacgtctatcag
cgcctgcaggccgtcgccgacaaccgcacccccgacgactgtctgctcgtctacttccgc
ggcatcttgctgtccggcccgggcggcggcctgtacctggccacccccgacacggtgatg
cagcgtcccgccgacaccgccgtcgacgtgacccgcctggacgcgctgatccaccgcagt
cacgccggtcaggtcgtgatcatcctggacggccgcaccggcggcccggtcgacgccggc
gcctacttcccggccgcccacgccgccgacaaccgcagccgcgtcctgctcaccgccgac
gcccgccccgaaccccccactttcgccggcctgctcgccgacggcctccgcggcggcgcc
gccgaccgcaaccgcgacggctacaccggcatcgacgaggtcatcgaccacctgcgcgaa
cgcgacccgtccgtccgccactggacgttcggcaccggtcgccagccctacctgtcgaag
gtccgcaagccgggcagcgaccagatggccctgatcgccgaactggccgcggcggccgcc
ggccccgacctcccgcaggccgcccaggcccgcaccaccctgtcccgcctcgccaccggc
agcgaccgggtcgccgccgccgccaccgccgccctgcgccgcacctccctgcgagtcccc
gacccccagatcactttcggccagacgcttcccggcggtcccgcgcagaccgcccgggtc
ccgctgaccgccccgcccctggtggccacctccaccgtgaccaccaccggcgacggcctg
caagcggtcctggacggctcgcacctccaggtcacctggcgccccggccggtcctccctg
accggctccgtcaccatcgacggccccaccggcgtcgcccacctgtccgtgaccggcgag
gtcaccccggagacctcggccctcccgaaaccgggcaccgcccctcagcccggacccgcc
ctacccggcgctgcccctcaccccggcgccacttcccagcccggcgccacttcccagccc
ggcgccgcctcccagcccggcgccgcctcccagcccggcgccgcctcccagcccggcgcc
gcctcccagcccggcgccgcctcccagcccggcgccgcccttcaccccggcgctgtctct
catcccggcgccaccgctgaatccggcagcggggctcaatccggcgccgctgctcgatcc
ggtcaatccgatgccaccgggcagggtggcaccgccctcgaaccgacgctgcctgcacca
ccgcctcgctgggccggcggcaacggcgtacggcccacgtccggggccccggcgggccag
ccgccgttcagcgctccggtcgacccctggcctgacgcccccacctcgacgaccccgccc
ccggcccggccggcggatccgtggccgaccgcacccgcctggctgcccgacgccagccct
caccaccgggtcgtcggcccgccctccgcacccggctcccacgaccaggtcaccagcccg
ctccccacttccggtgccccggatcagaacaccgaccgcgccccggcctccggcgcgcat
gaccagacgacgagtgccctgacctcgccgccggccgcccatccgcagtcccgtccgcag
atttcgcagggcccgtggtccggcgccccgagtcgccccgccgccccatggtccaccggc
accaccgaagacccgtcccacccgagcggcacgtggtgggcgcagtcccccggcgccggt
cagcagccggaacgcacctccccgaccgtccccaccacccggccctcggcccagccccct
tcgcagcgtcgtcccgaccacgacgccacaccgacccgcactcccgagccggccagcccc
ctttcagcgtccgcgccctccccggccgccactcccccggccgaaatccacccggctgga
atccacccggccgaaatctggcccggttcccctgccgagccgtccacccagacggagagc
cacgtcccatggccgggctccctcaccgccatgcaggccgacaccaccccggcacctgtc
gccgacgctctcccctcaacgcttgaagccccgatccacccgcccggaccttccacctct
cgccccgagtccccggctccttctcctgctcccgccccggttcccggtcccactccttct
tctgttcctgctcccgtctggtccgatgtcacgcccgcctggtccgacgccgcctcgacc
agccccagcgactccggtgtggatcaggtcgcccctctgacagatcccgttacgccgaac
catccggcgcccgaggagtccggcccaccccaggccgaagacgacgtgatcgaccaccga
accgagtcgcctgccgattccagcgcccgcgaagccacacccccgagcgatccggaagcg
ctccgcctcagctccggcgccgaaacacaggcatggcccccggatccagccgccgacccg
gatccggtcgacaacccagctgaggttgacagcccgagcgcgcctgacagccccgccggg
ctcgacagccgcgccgcggttgacagccgcgccgcggttgacagccccgccgcggttgac
agccccgccgcggttgacagccccgccgcggttgacgaccggagcaccccacgcgcagcg
gacatcgcggatacgccgagcaccccgcccgccccggccgagcagcacaccaccggtaac
cgatccgccgccgtagccgcggccgcagccggcggtttcgtaggcgcttggctgaacaca
cagtcctcccccagcgatccccccgtccaggagcagccgatcgcgccggaccagaacccg
gggacgctgccccacagccgccaagaacaaccagcatcgaagggcgccgcaccagcgaca
cccccaacagccaacggcgacaccccggcggcccccgacccggtagtacctgaccccgca
acaccgggatcaccggtgacaccgacgttgtcgcctgccggcccctggcccggcgaccag
ccctccggccgcggcgcgttctacgcgcagcagcccggtttcggctggcagcaggccccc
gccaacccctccgattccgccgctccccccgaatccgtcggccccgccgactccgccgac
tccgccacccccgccgaacactggacgaccgctgccggccaggcccagcagtcctccgat
cctgccggcccgtggccgggcacctccgatcccgccggcccatggccgggcaccgccgtt
cccggccagtcctggccgtcccgcggcaccccgcatgagcagagcgaccgcacaaccgtc
tcctgggaggcgggttccgccgcagccgcagccggtggctggccccgatccaccgatccg
gcgaccgacccggcagtcccccaccggccagagtccccggtcccgactggcccacagtgg
ccgggtcaagccgccgcggcagatcaagccaccccaccggaaccgcccacctggccccca
cccccacatccctctgcagcaccgtcgaccgccccagcgagtggcgtcggcccgggcgga
tcctcgtcgcgcgtaagctggatcggcccgaacgactggccctcgacagccgacaccccc
ggccatggaccgaccggtgctcccggccatggacccatcggtgctcccggccccggacga
gccggcattcccggcgccgcaacagccggcgccgcaggtcccggacaggccggcattccc
ggtgcgggaattgccggcgccgcaggtcccggacaggccggcattcccggtgcgggaatt
gccggcgccgcaggtcccggacaggccggcattcccggtgcgggaattgccggcgccgct
ggtcgcggaccggccggccccggctccccgccggcacccccttccggaacaggtccggct
gatgctcccggagtctccggcccccacagcggctcggagaccacggcctggggtggcgtc
cagtccccgagcggatggcagcaggcgcagaccgccgcccccgccaatccggcatggccg
acctcgcccgccgggtggccggccgctcccggatggcagcagcccggcgtagcgtcgccc
gcggcgggtggcgatccggcgtacgccaataatcctccgcaggagaagcggcgcctgcgc
gtcgcggggatccttgttcttgctctgcttctcgcggccggtgcgtatctcggcatccgg
tacgccgcgggccgcggtcgggagcaggccgccccgccgccgacggtggctcagacgctg
accggcacgccgccgtcggggcaggcgaccggaccggccacgacgaccccggcgccggcg
agtctcggcaccccggtcgtgctgaacacgatcaagggggtcggccgggagccggagggt
gtcgtcgtctcgtcggacagcaagacgctgttcgtcgcggatcagggcgccaagcaggtt
ttcgtcgtcgatgccgcgagtgggaaggcgcagccggtcgacgtaccgaacacgccgcgt
ttcctgaccctgtcgaaggacggtgcgaagctctacgtctcgatgttcgagaacgatttc
agcgccaacgggctcgcggtgatcgacacggcgaagcgcagcgtgatcacgtcggtgaag
acggggccacggccgttccagccggctgtcgccgcggacgggcgggtctggctgccgatc
cacaacggggcccgggtggagatctacgacgggacgacgctggcccggttgtcgcagatc
agcgtgccgccgaatccgcactggatcgctttcacgccggacgggtcgcgcgcgttcacc
tcggatcacgagtcgagccgggtgtcggtggtcgacacggcgtcgttggcggtgctgaac
accatcacggtcggccggtcgccgcacagcctggcggtcaccccggacggcggcaccgtg
gtggtcaccaactatgacgtcgacaccgtggagacctatgacacgaggacgctgaagctg
actcagcgttatcaggtggggaaactgccgcaggcggtgctggtgtcggcggacggtgcg
cacgcctacgtggtgaacgagggctcggacaccctgtcggtgctggatctccccgcgcgg
aaggtggccgccacgatcccggtcggggacagcccgcgggtggtgggtctgtcgccggac
ggcctgcggctgtacgtgaccgcggggcgggacggtgcgatcacggtgctgaaggcggcc
gacggctga
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