Actinoplanes sp. SE50: ACWT_2824
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Entry
ACWT_2824 CDS
T05392
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acts03016
]
ACWT_2824
Enzymes [BR:
acts01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACWT_2824
Transfer RNA biogenesis [BR:
acts03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACWT_2824
Prokaryotic type
tRNA splicing ligases
ACWT_2824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ATO82239
LinkDB
All DBs
Position
complement(3221003..3222163)
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AA seq
386 aa
AA seq
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MPQIVNERLLNWASLIEPETLQQAEKASRLPFIHPHIALMPDAHLGKGATVGSVIPTRGA
LIPAAVGVDIGCGMAAVRTQYRVEDLRPDRAALRTAIEAAVPLSAGSYNSRVTASAQHRI
DRLTAEASFDPARYAKNWQLQLGSLGSGNHFIEVCRDESGRVWLFLHSGSRGVGNKIASH
HIQVARDLMDRRGIDLPDRDLAYLEEGTDEFDAYLTELRWAQNFALANRDEMMDRVIECF
ADFAGGPVEQRDRVQCHHNYTEQESHYGETVWLSRKGAINAAKGVPGLIPGSMGDASYVV
TGRGNAEALNSSPHGAGRAYSRSKARRTFTREQLRTAMKGIEYRDTDAFLDEIPQAYKPI
DTVMRDAADLVTIRHTLRQLVNVKGD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcagatcgtcaatgaacgcctgctcaactgggccagcctgatcgagccggagacc
ctgcagcaggccgagaaggcgtcccggctgccgttcatccacccgcacatcgccctgatg
cccgacgcgcacctcggcaagggtgccaccgtcggctcggtgatcccgacccgcggcgcg
ctcatcccggccgcggtgggtgtcgacatcggctgcggcatggccgccgtgcgcacccag
taccgggtcgaggacctgcgcccggaccgcgccgcgctgcgcaccgccatcgaggccgcg
gtgcccctgtcggccggctcctacaactcccgggtgaccgcctccgcccagcaccgcatc
gaccggctgaccgccgaggcgtcgttcgacccggcccgctacgcgaagaactggcagctg
cagctcggctcgctgggcagcggcaaccacttcatcgaggtgtgccgtgacgagtccggc
cgggtctggctgttcctgcactccgggtcgcgcggcgtcggtaacaagatcgcctcgcac
cacatccaggtggcccgcgacctgatggaccggcgcggcatcgacctgcccgaccgcgac
ctggcctacctggaggagggcaccgacgagttcgacgcctacctgaccgagctgcgctgg
gcacagaacttcgccctggccaaccgggacgagatgatggaccgggtgatcgagtgcttc
gccgatttcgccggcgggccggtcgagcagcgcgaccgggtgcagtgccaccacaactac
accgagcaggagagccactacggcgagacggtgtggctgtcccgcaagggcgcgatcaac
gcggccaagggcgtgcccggcctgatccccggctcgatgggcgatgcctcctacgtggtg
accggccggggcaacgccgaggcgctgaactcgtccccgcacggggccggccgggcgtac
tcccgctccaaagcccgcagaaccttcacccgggagcagctgcgcaccgccatgaagggc
atcgaataccgggacaccgacgccttcctggacgagatcccgcaggcctacaagccgatc
gacacggtcatgcgggacgccgccgacctggtcaccatccggcacacgctgcgtcagctg
gtcaacgtcaagggcgactga
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