Actinoplanes sp. SE50: ACWT_2845
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Entry
ACWT_2845 CDS
T05392
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
acts
Actinoplanes sp. SE50
Pathway
acts00040
Pentose and glucuronate interconversions
acts01100
Metabolic pathways
acts02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ACWT_2845
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACWT_2845
Enzymes [BR:
acts01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ACWT_2845
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ATO82260
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Position
complement(3239368..3240876)
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AA seq
502 aa
AA seq
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MKRNRIIAAAGTAVTAGVIAVALPLPQANAATAGATGYAGQNGGTTGGAGGAVVHATTGT
QIHQALCSRATSSTPIVIQVEGTINHGNTTKVSGAGCNTAADKIELKQVSNVTIVGVGAG
AVFDQLGIHIRDSSNIIIQNVQIQNVKKSGSPTSNGGDAIGMESTVRNVWVDHVNLLASG
GEAQGYDSLIDMKDNTQYVTLSYSTLRNSGRGGLVGSSESDLGNGYITYHHNLYENIDSR
TPLLRGGIAHIYNNYYVRLNKSGINSRAGAKARVDNNYFQDSQNVLGTFYTDAAGYWQVS
GNIFDNVTWTAPDGETNPAGPDPVSNTSVSIPYAYTLDAASCVPAIVRQTAGANTGLKVS
DGRCSTTSPSATGSPTPSATTPPSGTNLSLGAGADGSSKAGGTSYGNVKDGDAGTYWSPS
GSTGDISIKWGSATTVSRVNVREIGSAVTTYRILNGATGAVLASGSGSGVITFPAVSLTR
ITFKIITASGTPRIAEFETYAS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagaaaccgcatcatcgcggcggccgggaccgccgtcaccgccggggtcatcgcc
gtcgccctgccactcccccaggcgaacgccgcgacggccggcgccaccggttacgccggc
cagaacggggggaccaccggcggcgccggcggggcggtcgtgcatgccaccaccggcacg
cagatccatcaggcgctgtgcagccgggccaccagcagcaccccgatcgtcatccaggtc
gagggcaccatcaaccacggcaacacgaccaaggtctccggcgccggctgcaacaccgcg
gccgacaagatcgaactgaagcaggtcagcaacgtgaccatcgtcggggtcggcgccggg
gcggtcttcgaccagctgggcatccacatccgggactccagcaacatcatcatccagaac
gtgcagatccagaacgtgaagaagtccggttcgccgacctcgaacggcggggacgcgatc
gggatggagagcaccgtccgcaacgtctgggtggaccacgtgaacctgctggcctccggc
ggtgaggcccaggggtacgacagcctgatcgacatgaaggacaacacgcagtacgtgacg
ctgtcctacagcaccctgcggaactcgggccgcggcgggctggtgggctccagcgagagc
gacctcggcaacggctacatcacgtaccaccataatctgtatgaaaatatcgactcccgt
acgccgctgctgcggggcggcatcgcgcacatctacaacaactattacgtgcgcctgaac
aagtccgggatcaactcgcgggccggggcgaaggcgcgggtggacaacaactacttccag
gactcgcagaacgtgctgggcaccttctacaccgacgcggccggatactggcaggtcagc
gggaacatcttcgacaatgtgacgtggacggcaccggacggcgagaccaacccggccggc
ccggacccggtctccaacaccagcgtgagcatcccgtacgcgtacacgctggacgccgcc
tcctgcgtgccggcgatcgtgcggcagaccgccggcgcgaacaccgggctgaaggtgtcc
gacggcagatgctcgaccacctccccgagcgcgaccggcagcccgacgccgtccgccacc
acgccgccgagcgggacgaacctgagcctgggcgccggggcggacgggtccagcaaggcg
ggcggcaccagttacggcaacgtcaaggacggcgatgcgggcacctactggtcgccgagc
gggtcgaccggggacatctcgatcaagtggggctcggcgaccacggtttcccgggtgaac
gtccgggagatcggcagcgcggtcacgacgtaccggatcctcaacggcgcgaccggcgcg
gtcctcgcgtcgggcagcggatccggtgtgatcaccttccccgccgtgtcgctcaccagg
atcactttcaagatcatcacggcttccggtacgccgcggatcgccgagttcgagacctac
gcgtcctga
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