KEGG   Actinoplanes sp. SE50: ACWT_3580
Entry
ACWT_3580         CDS       T05392                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
acts  Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:acts00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acts03021]
    ACWT_3580
Transcription machinery [BR:acts03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACWT_3580
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_10 HTH_Crp_2 HTH_23 MarR NirdL-like_HTH HTH_24 HTH_3 MarR_2 HTH_Tnp_ISL3 DUF134 HTH_31 Sigma70_ECF PF0610-like_N DUF7343 GerE HTH_37 HTH_CodY HTH_Tnp_4 IF2_N Rad51 HTH_ParB
Other DBs
NCBI-ProteinID: ATO82995
LinkDB
Position
4119591..4120385
AA seq 264 aa
MTVIAETATHVDAAASTDPASELITAMAALPAGHPSRPGLRDRAIEAWLPLARHLANRYA
NRGEPRDDLHQVAVVGLIKAVDRFEADRGVDFAGFAIPTIAGELKRYFRDKTWSVRVPRR
LQELRLAITTANNTLSHTLGRSATVADIAEHLGITEDEVIEGLEGARAYNSTSLSTPVSE
NGSELGDTLGGMDAGFEEAELRIALGPAMAALDEREQKIVSLRFYGNLTQSQIAEQIGIS
QMHVSRLLTKALAKLRSRLDGAII
NT seq 795 nt   +upstreamnt  +downstreamnt
atgactgtcatcgctgagaccgcaacccacgtcgacgccgcggcgagcaccgacccggcc
agtgagctgatcaccgcgatggcggcgctcccggccggacatccgtcccggcccggcctg
cgcgaccgggccatcgaggcgtggctgccgctggcccgccacctggccaaccggtacgcc
aaccggggcgagccgcgcgacgacctccaccaggtcgccgtcgtcggcctgatcaaggcg
gtggaccggttcgaggcggaccgcggcgtcgacttcgccggcttcgcgatccccaccatc
gccggcgagctcaagcgctacttccgggacaagacctggtcggtgcgggtgccgcggcgg
ctgcaggagctgcgcctggcgatcaccacggcgaacaacacgctcagccacacgctgggc
cgctccgccacggtcgccgacatcgccgagcatctcggcatcaccgaggacgaggtgatc
gagggcctggagggcgcccgcgcctacaactcgaccagcctgtccaccccggtcagcgag
aacggctcggagctcggcgacaccctcggcggcatggatgccggcttcgaggaggccgaa
ctgcgcatcgccctgggcccggcgatggccgccctcgacgagcgcgagcagaagatcgtg
agcctgcgcttctacggcaacctgacgcagtcgcagatcgccgagcagatcggcatctcc
cagatgcacgtctcccggctgctgaccaaggccctcgccaagctccgctcccgcctcgac
ggcgcgatcatctga

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