Actinoplanes sp. SE50: ACWT_4692
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Entry
ACWT_4692 CDS
T05392
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ACWT_4692
Enzymes [BR:
acts01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ACWT_4692
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ATO84107
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Position
complement(5249220..5250863)
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AA seq
547 aa
AA seq
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MPISRLTPGLHRRPTRRRAVLAGGLAAVAAVAGIGLLGGQPFASAEANISFDNGSGMSFV
VDARNGNLTSLQHNGTELTAPGRAAGQIESGWKSAAVSSRTFADRSILVTVDEREVGETQ
YYYARRGDNTIYMATDIRQPQNPGEARFITRLNRSLLTTSPVAARTAGTVAAVEGSDVFK
FADGRTASKFYSSQRLITQQPFGASGHGHGAYLVPGTGEMSSGGPFFRDIEVNDTGDAVN
ITYCMNSGHTQTEPLRLGLQGPYALALTDGPAPARHSLDFLSAYIPGLLSNAQRGGVQGT
ATGSWNGQRATVALAGPNGQYWSQVKAGRFLIGHIRPGTYTASLYAGELAVGVAKEVTVT
AGATTTVALSGNVPAAGTLFQLGAFDGTPAGFRNADKIETMHPSDPRMAPWNVGTFDIAS
GAANFPMAEFQAVNAPLAIRFPLRAVPAKGVRLRVATTLNFAGGRPAVAIGSYRSPVSAS
PAPRDLKSRGVTRGTWRGVNTTYVFDIPAAALKEGANTLSLSVVSGSTGTTFLSPNFVFD
ALALDPA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcccgactcaccccggggctgcaccgtcgtcccacgcgtcgccgtgccgtg
ctggccggcggccttgccgcggtagccgcggtagccggtatcggactgctcggcggacag
ccgttcgcctctgccgaggccaacatcagcttcgacaacggctcgggcatgagcttcgtg
gtggacgccaggaacggcaacctgacgtcgctgcagcacaacggcaccgaactgaccgca
ccgggccgggccgccgggcagatcgagtcggggtggaagtcggctgccgtcagcagcagg
accttcgccgacaggtcgatcctcgtcacggtcgacgagcgcgaggtcggcgagacgcag
tattactacgcccgccggggcgacaacacgatctacatggccaccgacatccgccagccg
cagaaccccggcgaggctcgattcatcacccgcctcaaccgttcgctgctgaccacctcg
ccggtggccgcccggacggccggcacggtggcggcggtggagggctcggacgtcttcaag
ttcgccgacgggcggaccgcctccaagttctacagctcccagcggctgatcacgcagcag
ccgttcggcgccagcggacacggccacggcgcctacctcgtcccgggcaccggcgagatg
agttccggcgggccgttcttccgcgacatcgaggtcaacgacaccggcgacgcggtcaac
atcacctactgcatgaacagcggccacacccagaccgagccgctgcggctcggcctgcag
ggcccgtacgccctggccctcaccgacggccccgccccggcgcggcacagcctcgacttc
ctgtccgcctacattcccgggctgctctccaacgcccagcgaggcggcgtgcaggggacg
gccaccggatcctggaacggccagcgagccaccgtcgcgcttgccggtccgaacgggcag
tactggagtcaggtcaaggccggccggttcctgatcggccacatccgccccggcacctac
acggccagcctgtacgcgggtgaactcgccgtgggcgtcgccaaggaggtcaccgtcacc
gccggcgcgaccaccacggtggcgctgagcggcaacgtgccggccgccggcacgctgttc
cagctgggcgccttcgacggcaccccggccggtttccgcaacgccgacaagatcgagacg
atgcacccgtcggacccgcggatggccccctggaacgtgggcacgttcgacatcgcctcg
ggcgccgcgaacttcccgatggccgaattccaggcggtcaacgcgcccctggcgatcagg
ttcccgttgcgcgccgtccccgccaagggtgtgcgcctgcgggtcgcgaccacgctgaac
ttcgccggcggccgtcccgccgtcgcgatcggcagctaccgatcgccggtctccgcctcc
ccggcgccccgtgacctgaagtctcgcggcgtcacccgcggaacctggcggggcgtgaac
accacctacgtgttcgacatcccggcggcggccctgaaggagggtgccaacaccctgtcc
ctctcggtggtcagcggcagcaccggaaccaccttcctcagcccgaacttcgtcttcgac
gccctcgccctcgacccggcgtaa
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