Actinoplanes sp. SE50: ACWT_5092
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Entry
ACWT_5092 CDS
T05392
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acts03019
]
ACWT_5092
Enzymes [BR:
acts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACWT_5092
Messenger RNA biogenesis [BR:
acts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACWT_5092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
FGAR-AT_PurM_N-like
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
ATO84507
LinkDB
All DBs
Position
complement(5695841..5698597)
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AA seq
918 aa
AA seq
DB search
MTSPADRYAESKRRAARVATFPALDDFMLDVGFDLDDFQRESCEALERGNGVLVCAPTGA
GKTVVGEFAVHLALRAGERKCFYTTPIKALSNQKFHDLVERYGPDKVGLLTGDNVINADA
PVVVMTTEVLRNMLYSGSSQLKNLAYVVMDEVHYLADRFRGAVWEEVIIHLPASVTLVSL
SATVSNYEEFADWLVTVRGETSVVVSEHRPVPLWQHMLVGRRMFDLFHDADAARKHDVHP
ELLRYTREMERRLELGERASGWNGRGGRGRRWQPPPRAEVVDRLERAGLLPAILFIFSRA
GCDAAVQQCLGAGLRLTDPDERAEIRRIAQAKVASIPAEDLSVLGYWEWLDGLERGVAAH
HAGMLPAFKEAVEECFVNGLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPG
EYTQLTGRAGRRGIDVEGHAVVLWSPEVDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVG
TVGADKSRELLESSFAQFQADRSVVGLARQVQRNVDTMQTYGADAACHHGDFDEYFGLRV
AIADREKAMARQGVAQRRSAANDSLSKVRIGDVIRVPQGRHAGLAVVLEPAAGGFGEPRP
MVLTQDRWAGRVSPAEFGGEVEVLARLRVPKNFNHRSPGARRDLAAQVSGTGLDRHPDRR
RSRGRANPGEDAEIALLKVKLRQHPCHACPEREDHARWAERRHRLQRDTDALRDKVAGRT
GSLARTFDQVCSVLTARGYLSHDGEVTEAGRTLGRIWSEADLLVAECLRQDVWAGLAPEE
LAAAVSMVLYESRREGEDRASVPKGPISEAVDACAKLWTEIATEEGEHGLSLTREPDPGF
VWPMFRWARGEPLAKVLASGHNYDADMPAGDFVRWARQVLDLLGQIREAAVASPGVKETA
RKAISAVNRGVLAYQAGL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgactagtcccgccgacaggtatgcggaatccaagcggcgggcggcgcgggtcgccacc
ttcccggcgctcgacgacttcatgctcgacgtcggtttcgacctggacgacttccagcgc
gagtcctgcgaggcgctggagcgcggcaacggggtgctggtgtgcgcgccgaccggcgcc
ggcaagacggtggtgggcgagttcgcggtgcatctggcattgcgcgccggcgagcgcaag
tgcttctacaccacgccgatcaaggcgctgtccaaccagaagttccacgacctggtggag
cgctacgggcccgacaaggtcggcctgctcaccggcgacaacgtgatcaacgcggacgcc
ccggtggtggtgatgaccaccgaggtgctgcgcaacatgctctactccggctccagccag
ctgaagaatctggcctacgtcgtgatggacgaggtgcactacctggccgaccgcttccgt
ggcgcggtctgggaggaggtgatcatccaccttccggcctcggtcaccctggtctcgctg
tccgccacggtcagcaactacgaggagttcgccgactggctggtcaccgtccgcggcgag
acctcggtggtggtctccgagcaccggccggttccgctctggcagcacatgctggtcggc
cggcggatgttcgacctgttccacgacgccgacgcggccaggaaacacgacgtccacccc
gagctgctgcgctacacccgggagatggagcgccggctggagctcggcgagcgtgcctcc
gggtggaacgggcggggtggccggggccgccgctggcagccgccgccgcgcgccgaggtg
gtcgaccggctggagcgtgccggtctgctgccggccatcctgttcatcttcagccgggcc
ggctgcgacgccgccgtccagcagtgcctgggcgccggtctgcggctcaccgacccggac
gagcgtgccgagatccgccggatcgcccaggccaaggtcgccagcatccccgccgaggac
ctgtcggtgctcggctactgggagtggctcgacgggctggagcggggcgtcgccgcgcac
cacgccggcatgctgcccgccttcaaggaggcggtcgaggagtgcttcgtcaacgggctg
gtcaaggcggtcttcgcgaccgagacgctggccctggggatcaacatgccggcccgctgc
gtggtgctggagcggctggtcaagttcaacggggaagcgcacgtcgacctcactccgggg
gagtacacgcagctcaccggccgggctgggcgccgcggcatcgacgtcgaggggcacgcc
gtggtgctctggagtcccgaggtcgacccgcggcacgtggccggcctggcctccacccgc
acctatccactgcgctcgtcgttccgcccgtcctacaacatggcggtcaacctggtcggc
acggtcggcgcggacaagtcccgcgagctgctggagtcgtcgttcgcccagttccaggcg
gaccggtcggtggtcgggctggctcgccaggtgcagcgcaacgtcgacacgatgcagacc
tacggcgccgacgccgcctgtcaccacggcgacttcgacgagtatttcgggctccgggtc
gccatcgccgaccgggagaaggcgatggcccggcagggggtggcgcagcgccggtcggcg
gccaacgactcgctgtccaaggtgcggatcggcgacgtgatccgggtgccgcagggtcgg
cacgccggcctggccgtggtgctggaaccggccgccggcgggttcggcgagccccggccg
atggtgctcacccaggaccgctgggccggccgggtcagtcccgccgagttcggcggcgag
gtggaggtgctcgcccggctgcgggtgccgaagaacttcaaccaccgctcccccggcgcc
cggcgggacctggccgcccaggtcagcggcaccgggctcgaccggcatccggaccggcgg
cgcagccggggccgggccaacccgggggaggacgccgagatcgccctgctcaaggtgaag
ctgcggcagcacccgtgtcacgcctgcccggagcgggaggaccatgcccgctgggccgag
cgccggcaccggctgcagcgcgacaccgacgccctgcgggacaaggtggccggccgtacc
gggtcgctggcccgcacgttcgaccaggtctgctcggtgctgacggcccgcggctacctg
tcgcacgacggtgaggtcaccgaggccggccggacgctgggccggatctggtcggaggcc
gacctgctggtcgccgagtgcctgcggcaggacgtgtgggccggtctggcccccgaggaa
ctggccgccgcggtgtcgatggtgctctacgagtcgcgccgcgagggtgaggaccgcgcc
tcggtgccgaagggaccgatcagcgaggcggtcgacgcctgcgccaagctgtggacggag
atcgccaccgaggagggcgagcacgggctgtcgctgacccgcgagcccgacccgggcttc
gtctggccgatgttccgctgggcgcgcggtgagccgctcgccaaggtgctggccagcggc
cacaactatgacgccgacatgccggccggcgacttcgtccgctgggcgcggcaggtgctc
gacctgctggggcagattcgcgaggcggcggtggcgtcgccgggggtcaaggagaccgcg
cgcaaggcgatcagcgcggtgaatcgcggggtgctggcctatcaggccggcctctga
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