Actinoplanes sp. SE50: ACWT_5195
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Entry
ACWT_5195 CDS
T05392
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acts03021
]
ACWT_5195
Transcription machinery [BR:
acts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACWT_5195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_10
HTH_23
HTH_Crp_2
GerE
MarR
DUF7343
DUF134
HTH_3
HTH_24
MarR_2
HTH_Tnp_4
Sigma70_ECF
HTH_CodY
HTH_AraC
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ATO84610
LinkDB
All DBs
Position
complement(5812201..5813010)
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AA seq
269 aa
AA seq
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MTTAPLHIHRSAGTASADPAPEATATELLDAMAVLPVGQRRCRVRDRAIEAWLPLARHLA
NRYAGRGEPTDDLIQTATVGLIKAVDKFDPERGVDFAGYAIPTIIGEIKRHFRDRTWSVR
VPRRLQELRLAITEANSTLTHALGRSPTVPDIAVHLGISEEDVLEGLEGARAYNATSLST
PINADGTTELGDTLGAEDHEYELAETRVALGPALALLDEREQRILTLRFYGNLTQSQIAD
QIGISQMHVSRLLTKALAKLRTQLAAETL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagctccgcttcatattcatcgatccgctgggaccgcctccgccgacccggcg
cccgaggccaccgccaccgagctgctcgacgcgatggccgtgctgccggtcggccagcga
cgctgccgggtccgtgaccgggcgatcgaggcctggctgccgctggcccgccacctggcc
aaccgctacgccggccgcggcgaaccgaccgacgacctgatccagaccgccaccgtcggc
ctgatcaaggccgtcgacaaattcgacccggagcgcggcgtcgacttcgccggctacgcc
atccccaccatcatcggggagatcaagcgccacttccgcgaccgcacctggtcggtccgc
gtcccgcgccggctgcaggagctccgcctcgccatcaccgaggccaacagcacgctcacc
cacgcgctgggccgctcgccgaccgtcccggacatcgcggtgcacctcggcatcagcgag
gaggacgtgctggagggcctggagggcgcccgcgcctacaacgccacctcgctgtccacc
ccgatcaacgcggacggcaccaccgagctgggcgacacgctgggcgccgaggaccacgag
tacgagctggccgagacccgggtggcgctcgggccggcgctggccctgctggacgagcgc
gagcagcggatcctgacgctgcgcttctacggcaacctgacccagtcgcagatcgccgac
cagatcggcatctcccagatgcacgtctcccgcctgctcaccaaggcgctggcgaaactg
cgcacccagctggccgccgagacgctgtag
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