Actinoplanes sp. SE50: ACWT_6041
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Entry
ACWT_6041 CDS
T05392
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acts03021
]
ACWT_6041
Transcription machinery [BR:
acts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACWT_6041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_10
MarR
DUF134
HTH_23
Sigma70_ECF
DUF7343
HTH_24
HTH_Tnp_4
HTH_31
GerE
MarR_2
HTH_37
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
ATO85456
LinkDB
All DBs
Position
complement(6793948..6794742)
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AA seq
264 aa
AA seq
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MTVIVDTAARADASASTDRASELINAMAVLPAGHPSRPGLRERAIEAWLPLARHLSQRYA
NRGEPRDDLYQVAVMGLIKAVDRFETDRGVDFAGFAIPTIVGELKRYFRDKTWSVRVPRR
LQELRLAITAANNTLSHTLGRAPTVTDIAGYLDVSEDEVIEGLEGARAYNSTSLSTPMSE
SGTELGDTLGGPDTGYEEVERRVMLGPAMAHLDEREQKIVTLRFYGNLTQQQIAEQIGIS
QMHVSRLLTKALAKLRRNLDGATR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatcgttgacaccgctgcccgcgccgacgcgtcggcgagcaccgaccgggcc
agcgagttgatcaacgccatggcggtcctgccggccggtcacccgtcccggcccggtctg
cgggagcgcgccatcgaggcatggctgcccctggcccggcacctgtcgcagcggtacgcc
aaccggggcgagccgcgcgacgatctgtaccaggtcgccgtcatgggactgatcaaggcg
gtcgaccggttcgagaccgatcgtggcgtcgacttcgccggtttcgcgatcccgaccatc
gtcggtgaactcaagcggtacttccgggacaagacctggtccgtccgggttccgcggcgt
ctgcaggaactcaggctggccatcaccgcggccaacaacaccctgtcgcacaccctgggg
cgcgccccgacggtcaccgacatcgccggctacctcgacgtcagcgaggacgaggtcatc
gagggcctcgaaggggcccgtgcctacaactcgacgagcctgtcgacaccgatgagcgag
agcggcaccgagctcggcgacaccctcggcggccccgacaccgggtacgaggaagtcgag
cgacgcgtcatgctcggcccggccatggcccatctcgacgagcgcgagcagaagatcgtc
accctgcgcttctacggcaacctgacgcagcagcagatcgccgagcagatcggtatctcc
cagatgcacgtctcccggctgctgaccaaggccctggccaaactgcgccgcaacctcgac
ggcgccacgcgctga
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