Actinoplanes sp. SE50: ACWT_6556
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Entry
ACWT_6556 CDS
T05392
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acts03032
]
ACWT_6556
03400 DNA repair and recombination proteins [BR:
acts03400
]
ACWT_6556
Enzymes [BR:
acts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACWT_6556
DNA replication proteins [BR:
acts03032
]
Prokaryotic type
DNA Topoisomerases
ACWT_6556
DNA repair and recombination proteins [BR:
acts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACWT_6556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATO85971
LinkDB
All DBs
Position
complement(7338160..7340217)
Genome browser
AA seq
685 aa
AA seq
DB search
MTAQPETLYGAADLTHLEGLDAVRKRPGMYIGSTDSRGINHLANEIIDNCTDEGVGGHAT
RIAITLHTDGSVQVDDDGRGIPTDVHAKSGLSGVELVLTRLHAGGKFGGSGYKASGGLHG
VGASAVNALSLRFDVTVKRDGKVHEISFQRGVPGVFDGPGPQASFTPQAGLRIARRMKRG
EPTGTSIRYWYDARYFETGARLDVEAVRTKLRNTAFLVPGVQYSLFDATAEEPHTETFHY
PNGLVDMVEFMTPAADKPVSGILVVTGEGTYKENAADANGVMQSNVVRHAQVEIAFRWGT
GYERSVECFTNTIRNVHGGTHRKGFERALVRALTEAIRNARGLLKPKEEPPVLDDFLEGM
TAVIHVRVPEPQFTSQTKDELSTAGVTRVMQTLVESYLKEWVDGRRTKTEARTVLQKVVD
AARVRLTQKQQKDAARRKTALEGASMPPKLVDCRSTGISRSELYIVEGDSALGTARMARS
SEYQALLPIRGKILNVQKASLQQVLDNAECSAIVQVLGAGSGRTFDIGAMRYGRVMIMAD
ADVDGSHIRTLLITLFAKYMRPVIEEGRLFAAMPPLHKVVTKGRNGDTVYTYTQQEMETT
VARIERSGKSVQKPVPRFKGLGEMDADELWDTTMNPASRTVRRITLDDAERAEATLELLM
GERVEPRKNWLIDAAGRIDQETIDA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacagccagagaccttgtacggggctgctgacctcacgcacctggaggggctg
gacgctgtccggaaacgcccagggatgtacatcgggtccaccgacagccgggggatcaac
cacctggccaacgagatcatcgacaactgcaccgacgagggcgtcggcgggcacgccacc
cggatcgccatcacgttgcacaccgacgggtcggtccaggtcgacgacgacggtcggggc
atcccgaccgacgtgcacgccaagagcgggctgagcggcgtcgagctggtgctcacccgg
ctgcacgccggcggcaagttcggcggctccggctacaaggcgtccggcggtctgcacggc
gtcggcgcctccgcggtcaacgcgctgtcactgcgcttcgacgtcaccgtcaagcgggac
ggcaaggtccacgagatctccttccagcgcggcgtgcccggcgtcttcgacggcccgggg
ccgcaggcgtcgttcaccccgcaggccggtctgcggatcgcccgccggatgaaacgcggc
gagcccaccggcacctcgatccggtactggtacgacgcgcggtatttcgagaccggcgcc
cgactcgacgtcgaagcggtccgcaccaagctgcgcaacaccgcgttcctggtccccggc
gtgcagtattcgctgttcgacgcgaccgccgaggagccgcacaccgagaccttccactac
cccaacggcctggtcgacatggtggagttcatgactccggccgccgacaagccggtctcc
gggatcctggtcgtcaccggcgaggggacgtacaaggagaatgccgccgacgccaacggc
gtcatgcagtcgaacgtcgtgcggcacgctcaggtcgagatcgccttccgctggggtacg
gggtatgagcggtccgtggagtgcttcaccaacacgatccgcaacgtgcacggcggcacc
caccgcaaaggcttcgagcgggctctggtccgtgcgctgaccgaggccatccgcaacgca
cgtggcctgctcaagcccaaggaggagccgcccgtcctggacgacttcctggagggcatg
accgcggtcatccacgtccgggtgccggagccgcagttcacctcgcagaccaaggacgag
ctgtccacggccggcgtcacccgggtgatgcagaccctcgtcgagtcgtacctgaaggag
tgggtcgacggccggcgcaccaagaccgaggcgcgcaccgtcctgcagaaggtggtcgac
gccgcccgggtccgcctcacccagaaacagcagaaggacgcggcccgccgcaagaccgcc
ctggagggcgcgtcgatgccgcccaagctggtcgactgccggtccaccgggatctcccgc
agcgagctctacatcgtcgagggggacagcgcgctcggcaccgcgcggatggcccgttcg
tcggagtaccaggcgctcctgccgatccgcggcaagatcctcaacgtgcagaaggcgagc
ctgcagcaggtgctggacaacgccgagtgctcggccatcgtccaggtgctcggcgccggc
tccgggcgcaccttcgacatcggcgcgatgcggtacggccgggtcatgatcatggccgac
gccgacgtcgacggctcgcacatccggacgctgctgatcaccctgttcgcgaagtacatg
cgcccggtgatcgaggagggccggctgttcgccgcgatgccgccgctgcacaaggtggtc
accaaggggcgcaacggcgacaccgtctacacgtacacccagcaggagatggagacgacc
gtcgcgcgcatcgagcgctccggcaagtccgtgcagaaaccggtgccccggttcaagggc
ctcggcgagatggacgcggacgagctgtgggacaccacgatgaacccggcttcccgcacc
gtccggcggatcacgctggacgacgccgagcgggccgaggccaccctcgaactgctcatg
ggtgagcgggtcgagccccgcaagaactggctgatcgacgcggcgggccgcatcgatcag
gagacgatcgacgcctga
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