Actinoplanes sp. SE50: ACWT_7078
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Entry
ACWT_7078 CDS
T05392
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acts
Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acts03016
]
ACWT_7078
Enzymes [BR:
acts01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACWT_7078
Transfer RNA biogenesis [BR:
acts03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACWT_7078
Prokaryotic type
ACWT_7078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ATO86493
LinkDB
All DBs
Position
complement(7964846..7965712)
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AA seq
288 aa
AA seq
DB search
MVDKPSGMTSHDVVARIRRLAKTRRVGHGGTLDPMATGVLIIGVNRATRLLTYVIGAEKS
YAATIRLGEATVTDDAEGEVTATVPVAGVADAAIRAGLAAQVGEIDQVPSAVSAIKINGE
RAYKRVRDGETVAIPARRVTVFRLDVLDIRRPADRDVIDVDVDVTCSSGTYIRAIARDLG
TALGVGGHLTALRRTAVGAMTLAAASTLEELAERAPDVVGLPMAEAARRAFPQRVADEEE
TRTLRHGGPLAAVGIEGPYAVFDADGEVLAIVSERGGRARAEIVLSPA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtggtggacaagccctcggggatgacgtcgcatgacgtggtggcgcggattcggcggctg
gccaagacccgacgggtcgggcatgggggcacgctcgatccgatggcgaccggtgtgctg
atcatcggggtgaatcgggcgacccgcctgctgacctatgtgatcggtgcggagaagagc
tacgccgcgacgatccggctgggggaggcgacggtcaccgatgacgccgagggcgaggtg
accgcgaccgtcccggtggccggcgtggcggatgcggcgatccgcgccgggctggccgcg
caggtcggggagatcgatcaggtgccgagtgcggtcagcgctatcaagatcaatggcgag
cgggcctacaagcgggtgcgggacggcgagaccgtggcgattccggctcgccgggtgacc
gtgttccggctcgacgtgctggacatccggcggccggccgatcgggacgtgatcgacgtg
gacgtcgacgtgacctgctcgtcggggacgtacatccgggcgatcgcgcgggacctcggg
acggcgctcggggtgggcgggcatctgacggcgctgcggcggaccgcggtgggcgcgatg
acgctggcggccgcttcgacgctggaggagctggcggagcgggcgccggacgtggtgggg
ctgccgatggcggaggcggcgcggcgggcgttcccgcagcgggtcgccgacgaggaggag
acccggacgctgcggcacggtgggccgctggcggcggtggggatcgaggggccgtacgcg
gtgttcgacgccgacggcgaggtgctggcgatcgtgagtgagcggggcgggcgggcgcgg
gccgagatcgtgctctccccggcctag
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