Actinoplanes sp. SE50: ACWT_7186
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Entry
ACWT_7186 CDS
T05392
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acts
Actinoplanes sp. SE50
Pathway
acts03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACWT_7186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acts03400
]
ACWT_7186
Enzymes [BR:
acts01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACWT_7186
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACWT_7186
DNA repair and recombination proteins [BR:
acts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACWT_7186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
DUF5830
Motif
Other DBs
NCBI-ProteinID:
ATO86601
LinkDB
All DBs
Position
complement(8082928..8083785)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVETVRMGLAKWVTGRTVSAVEVHHPRAIRRHLPGDTHFIAMLTGRTILDVARRG
KYLWLPLDSGDAIIAHLGMSGQLLMQPGTADDEKHLRVRFRFTDDGPELRFVDQRTFGGL
SVSEGGADLPAEISHIARDPIDPLFDDDAFSARLRGRHTEVKRALLDQSLISGVGNIYAD
EALWRARLHGTRPTDKLSRPAVARLLQHVRDVLGEAIVAGGTSFDELYVNVNGESGYFDR
SLNAYGREGEPCKRCGAIMRRESFMNRSSFSCPRCQPKPRLTHAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagctacccgaggtcgaaaccgtccggatgggcctggccaagtgggtgaccggc
cgcaccgtctcggcggtcgaggtgcaccacccccgggcgatccgccggcacctgcccggc
gacacccacttcatcgccatgctgaccggccgcaccatcctggacgtcgcccgccggggc
aaatacctgtggctgccgctggactccggcgacgcgatcatcgcccacctggggatgagc
ggccaactcctgatgcagcccggcaccgccgacgacgagaaacacctgcgggtccggttc
cgcttcaccgacgacggccccgagctgcgcttcgtcgaccagcgcacgttcggcggcctg
tccgtctcggagggcggcgccgacctgcccgccgagatctcgcacatcgcccgcgacccg
atcgacccgctcttcgacgacgacgccttctccgcccgcctccgcggccggcacaccgag
gtcaaacgcgccctcctcgaccagtccctgatctccggcgtcggcaacatctacgccgac
gaggccctctggcgcgcccggctgcacggcacccggcccaccgacaaactgagcagaccg
gccgtcgcccgcctgctgcagcacgtccgcgacgttctcggcgaagccatcgtggccggc
gggacgagcttcgacgagctgtacgtcaacgtgaacggggagagcggctacttcgaccgc
tcgctcaacgcctacggccgcgagggcgaaccctgcaaacgctgcggggcgatcatgcga
cgggagagcttcatgaaccgttcctcgttcagctgcccccgctgccagcccaaaccccgc
ctgacacacgccgcctga
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