Actinobaculum sp. 313: DDD63_05840
Help
Entry
DDD63_05840 CDS
T05430
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
actt
Actinobaculum sp. 313
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
actt03051
]
DDD63_05840 (pafA)
Enzymes [BR:
actt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
DDD63_05840 (pafA)
Proteasome [BR:
actt03051
]
Prokaryotic proteasome
Bacterial regulatory particles
DDD63_05840 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AWE42351
LinkDB
All DBs
Position
1355126..1356493
Genome browser
AA seq
455 aa
AA seq
DB search
MGIETEYGLTCAHTQGAAPPLDPEQAAQELFAPIIAMGRSTNSFLANGGRLYLDVGAHPE
YATAECDVLVDLLANDRAGELLFADLAARANEHLANQGIPGRIHLFKNNNDAEGNSFGCH
ENYLVRRRSDFRTRISSMLPYFVTRQIVVGAGHLRREDGRVTFEFSQRADQMWDAISSAS
TRSRPMINTRDEPHGDAELYRRMHVIVGDSNIAQATTALKMAATEALLIMIEDGGILPNL
TLADPMRAIRATSEDLTGRVPLELAAGGTATPLEIQRRMRDAVLQHFERKGYLAELDATR
RYLFDLWGRALDAVEAQDPASIATEIDWAAKLSLLRRYCDRSGLTLEDARIARLDLAYHD
ITDRGLRATMEQSGLLRTLLPAHAAEKAMKMPPQTTRARIRGEFIRAAQAHRRDYMADWM
NLRLLEAQGTRSVVLKDPFATVDARADELMAQIAE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgggcatagaaaccgaatatggtttgacctgtgctcatacacagggcgctgcgcctcca
ctcgatccggagcaggcggcccaagaattattcgccccgatcatcgccatgggaaggtca
acaaacagtttcctagcgaacggaggacgcctctacctcgatgtgggcgcacatcccgaa
tatgccacggcggaatgcgacgtattggtagacctcctggcaaatgaccgtgccggtgag
cttctatttgcggatcttgccgcacgggcgaacgagcatctggccaatcagggcattccg
gggcgtatacacctgttcaagaacaataatgacgccgagggaaactccttcggctgccac
gagaactacttggtccgacgtcgctcggatttccgaactcgcatttcgtccatgcttccg
tactttgtgacacgccaaatcgtggtgggggcgggccacttgcgccgagaggatggccgg
gtgacgttcgagttctcacagcgtgccgatcagatgtgggatgcgatttcatcggcttct
acgcgctcgcgtccgatgatcaatacgcgggacgagcctcatggcgacgcggagctatac
cgccgtatgcacgtgattgttggtgactcgaatatcgcccaagcaaccactgcactcaaa
atggctgcgaccgaggctcttctcatcatgattgaggacggtggaatcctgccgaatctg
accctggcagaccccatgcgggcgattcgcgccacgagtgaggatctcaccggccgcgtt
ccgctcgaattggcggcgggaggtacggccacgccgttggagattcaacgccgcatgcgc
gacgccgtcctgcagcatttcgaacgcaaagggtacctggcggagcttgatgccacgcgc
cggtacctattcgatttgtggggacgagctctcgacgcggtggaggcgcaggatccggcg
agtattgccacggaaattgattgggcagccaaattgtctctgctgcggcgctactgtgat
cggagcggactgacgctggaggatgcacgtattgctcgtctcgacctcgcctaccacgac
atcacggaccgtggcctgcgggcaaccatggagcaatcgggtctgctacgaacgctactg
cccgcgcacgcggcggagaaggcgatgaagatgccgccgcagaccactcgcgcgagaatc
cgtggagagtttattcgcgccgcgcaggcgcaccggcgggactatatggccgactggatg
aatctgcggttgttggaggcgcagggaacccgcagtgtggttttgaaagatccgtttgcg
acggttgatgcacgcgcggatgaactcatggcgcagattgcggaatga
DBGET
integrated database retrieval system
