Actinobaculum sp. 313: DDD63_06840
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Entry
DDD63_06840 CDS
T05430
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
actt
Actinobaculum sp. 313
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actt03032
]
DDD63_06840
03400 DNA repair and recombination proteins [BR:
actt03400
]
DDD63_06840
Enzymes [BR:
actt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DDD63_06840
DNA replication proteins [BR:
actt03032
]
Prokaryotic type
DNA Topoisomerases
DDD63_06840
DNA repair and recombination proteins [BR:
actt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDD63_06840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AWE42513
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Position
1576580..1579012
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AA seq
810 aa
AA seq
DB search
MRKTATPPADENIVDIDVSKEMRTSFLEYSYSVIYSRALPDARDGFKPVQRRILFQMDQM
GLRPDRGHVKSSRVVGDVMGRLHPHGDVAIYDAMVRLAQPFTMRLPLVDGHGNFGSLDDG
PAAPRYTEVRLAPAALAMTASLDEDVVDMVPNYDNTLMQPEVLPAAIPNLLVNGSSGIAV
GMATNMPPHNLVEVVNGARHLLTHPEASLEDLMRFIPGPDLPEGGKIVGLDGVREAYATG
RGIFRTRATARIENITARRKGIVFTELPYLVGPEKVIDRLKDAISAKKVQGVSGVQNLTD
RHHGMRLVVELKSGFNPDVVLGQLYRHTPLEDSFGINNVALVDGQPRLLGLKELLRVFLD
HRISVTRRRSSFRLNKAQHDLHLVDGLLIAVLNIDEVIAVIRSSDDTASARTRLMQVFDL
SEQQAEYILELRLRRLTKYSQIELEQRREELLAQIAELEEILGSEERLRDVVSGELADVA
REYGTPRRTVLLESDGATDLVAAAKNQSAELADDPCWVMLSGTGLLARSGDAVRPSYEGA
RVAHDAVVSAVPSTVRGQVGVVTSAGRICRLDVVDAPAIPPTTTAPSLAGGTPLSELLTL
GSDERPLALVDLSADAPPLAMATAHGRIKRLNGGHPAKDAWDVITLGDGDSVVAAAHCAD
SEQIVLVTTDAQLLRFSAETVRPQGRNGQGIAGIRLSDGARVLALGVVPGNDIAGSLVVT
VAGASDALPGTVAGSAKVTPLDRFPAKGRATGGVRAQRFLRGEDCLQLAYVGPAPLRAVG
SGGQALELPKIDERRDASGTALVAPVAAIG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagactgcgacaccgcccgccgatgagaacatcgtcgatattgatgtctcgaag
gagatgcgcacttccttcctcgaatactcatattcggtgatctactcgcgtgcgctcccc
gatgcccgcgacggcttcaagcccgtgcagcgtcgcattcttttccaaatggaccagatg
ggcctgcgccctgaccgcgggcatgtgaagtcctcccgcgtagtcggcgacgtcatgggc
cggctccacccgcacggcgatgtagccatctacgacgccatggtccgcctcgcccaaccc
ttcaccatgcgcctgccgcttgtcgacggccacggcaatttcggctccctcgatgacggc
ccggccgctccccgctacacggaggtgcgtctcgcaccggcagccctcgccatgacggcc
tcactggatgaggacgtggttgacatggtgccgaattatgacaacacccttatgcagccc
gaggtgctccccgcggccattccgaacctgctggtcaacggttcctccgggatcgctgtt
ggcatggcgacgaatatgccaccgcataacctggtggaggtggtgaacggtgcacggcat
ctgctcacccacccggaagcatcgctagaagatctcatgcgcttcatccccgggccggac
ctgcccgaaggcggaaagatcgttgggctcgacggtgtgcgggaagcctacgccaccggc
cgcggcattttccgcacccgagcgacggcgcggatcgagaacatcaccgcccgccgcaag
ggcatcgtcttcaccgaactcccctacctcgtgggcccggaaaaggtcatcgaccggctc
aaagatgcgatcagcgcaaagaaggtgcagggcgtctccggcgtgcaaaacctcaccgat
cgtcatcacggcatgcgactggtcgtcgagctgaaatccggcttcaaccccgatgtggtg
ttgggccagctataccggcacaccccgttggaggattccttcggcattaacaatgtcgcc
ctggtcgatggtcagccgcgactgctgggattgaaggaactattgcgggtctttctcgac
caccgtatctccgtgacgcggcgtcgttcatctttccggctcaacaaggctcagcacgac
ctgcacctggttgacgggcttctcatcgcggtactcaatattgacgaagtcatcgctgtc
attcgttcttctgacgacaccgcatccgcccgcactcgcctcatgcaagtgttcgaccta
tccgaacagcaggctgaatacattcttgaactacgtctgcggcgcctcacgaagtactcc
cagatagaactggaacagcgccgcgaggagcttctggcgcaaatcgccgaactcgaagaa
attctcggctctgaggagcgtctgcgcgacgtcgtctccggggagctggccgatgtcgcc
cgcgagtacggaacaccacgccgcacggttcttctcgaatcggatggcgcaacggatctc
gtcgcagcggcgaagaaccagtcggcggagttggccgacgatccctgctgggtcatgctc
tcgggcaccggtcttctcgcccgaagcggtgatgcggttcgccccagctacgaaggcgcc
cgtgtggcgcatgatgccgtggtttccgccgttccctccaccgtgcgcgggcaggtagga
gtcgtcaccagcgcgggccggatttgccggttggacgtggtggacgcaccggcaattcct
ccgacgacgacggcaccctcgctcgcgggcggcaccccgctgtcggaactccttaccctg
ggaagcgacgagcgcccactggcgctggtagacctgagtgcagatgctccacccctcgca
atggctaccgctcacgggcgtatcaaacggctcaatggcggacaccccgccaaggacgcg
tgggatgtcattacattgggcgacggcgattccgtcgtcgccgccgcacactgcgctgat
tccgaacagatcgtcctggtgacaaccgatgcgcaactactgcgtttctccgccgagacc
gttcgcccgcaaggtcgcaacgggcagggcattgccggtattcgtctttccgacggggcg
cgggtactcgcactcggcgtagtgcccggcaatgacattgccggttcgcttgtggtcacg
gtggcgggtgcctcggatgcacttccgggaacggttgccggcagtgcaaaagtcacgcct
cttgaccgcttccccgccaagggccgtgcaaccggtggagtacgtgctcagcgcttcctg
cgcggggaggattgcctgcagttggcatacgtgggcccggccccgctgcgagccgtgggc
agcggagggcaggcgttggagttgccgaaaatcgacgagcggcgcgacgcctccggcaca
gcgcttgtcgcgcccgttgccgccatcggctga
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