Actinobaculum sp. 313: DDD63_08480
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Entry
DDD63_08480 CDS
T05430
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
actt
Actinobaculum sp. 313
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actt03019
]
DDD63_08480
03009 Ribosome biogenesis [BR:
actt03009
]
DDD63_08480
Messenger RNA biogenesis [BR:
actt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDD63_08480
Ribosome biogenesis [BR:
actt03009
]
Eukaryotic type
Pre-60S particles
RNases
DDD63_08480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TMEM52
RILP
Motif
Other DBs
NCBI-ProteinID:
AWE42773
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All DBs
Position
1948841..1949608
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AA seq
255 aa
AA seq
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MEYIPPGSRPGASHLLSQHNTFVHCGVQASTLAAVTTHDAATREPNTPIVWIDCEMTGLD
IDVDELVEVSVVITDSDLTPVDAGIDLIIKPTPGAVEHMGDFVRQMHTNSGLIKEWEGGL
ELGEASAQVLDYIKRHVPEARRAPLGGNSVGTDRTFLAKYMPEVVEHLHYRVVDVSSIKE
LAKRWYPRAYFASPEKTGNHRALGDIYDSIDELRYYRSVLMPDGEGPTTAHCKTAAATAA
GTTARIAQAPQTAEG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggagtacatcccacctggatccagacccggagcatcacacctcctctcacaacacaac
accttcgtccactgcggcgtgcaggcgagtacacttgccgccgtgactacccatgatgca
gcaactcgtgaaccgaatacccctatcgtgtggatcgactgcgagatgaccggcctagac
atcgacgtcgacgagctcgtcgaggtctccgtcgtaatcaccgattccgatctaactccg
gtcgacgcggggattgacctcatcatcaagcccacaccgggtgccgtcgaacatatggga
gacttcgttcgccagatgcacaccaactccgggttgattaaggaatgggaaggtggcctt
gaactgggcgaggcctcagcacaagtcctcgactacatcaagcgtcacgtacccgaggcc
cgcagggctccactgggtggcaattccgtgggcacggataggaccttcctcgccaaatac
atgccggaagtcgtcgagcatttgcactatcgggtagttgatgtctcctccattaaagaa
ctcgccaaacggtggtacccacgcgcctatttcgcttcaccggagaagaccggcaaccac
cgtgccctcggtgatatctacgattcgattgacgagttgcgctactaccggagcgttctt
atgccggacggcgagggcccgacgacggcgcactgcaaaaccgcggccgctaccgccgcc
ggcacaaccgcccgcatcgcgcaagccccgcaaaccgcagaaggctag
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