Actinobaculum sp. 313: DDD63_09075
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Entry
DDD63_09075 CDS
T05430
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actt
Actinobaculum sp. 313
Pathway
actt03420
Nucleotide excision repair
actt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DDD63_09075
03430 Mismatch repair
DDD63_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actt03400
]
DDD63_09075
Enzymes [BR:
actt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDD63_09075
DNA repair and recombination proteins [BR:
actt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DDD63_09075
MMR (mismatch excision repair)
Other MMR factors
DDD63_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
kleA_kleC
Motif
Other DBs
NCBI-ProteinID:
AWE42869
LinkDB
All DBs
Position
complement(2094363..2096372)
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AA seq
669 aa
AA seq
DB search
METPQELLEHLDPEQREVATHLRGPLCVRAGAGTGKTRAITYRIAYGVHAGAFEPNHVLA
VTFTARAAGEMRSRLRDLGVSGVVARTFHAAALSQLSYFWSTAIGGRMPPVTEHKGALVA
QAAARLGMSYDRVAVRDLTAEIEWAKVSLITPEAYAERAAAAGHIDVAGHSAAEIVQLLR
VYEEVKEDAHQIDFEDTLLYLVGILLDRPDIARQIRGQYRHFTVDEYQDVSPLQHRLLQL
WLGESRELCVVGDVSQTIYSFTGASSLYLAHFTDEFKDARVIELIRDYRSTPQIVATAND
VIASDVSEGAVRLVSQVPSGVPVKWKEYEDDAAEAADIASNIRELQLAGVPLGDMAILYR
TNAQSAEFEAALSNVGVGYTLRGSERFFSRREVREAMVALRAAARSGVQGPLADNVRATL
RQMGWRDEAPEVAGAVRERWDALNALLNLATEMEHVRSASMLDFVRELEERAQTQNTPEV
DGVTLSSLHAAKGLEWRVVFLAGLSEGLLPISLAKRAADVAEERRLLYVGVTRAKEQLYL
SYAKGNGSRAGRKVSRFLSPLWPREEKPVSRATSYRQRRTAEAAAFVAEHGEDVALFEEL
AAWRTARAREMGRPPYTVLHDTTLRAIAIAKPMTLPALGRIKGIGDTKLASWGDDILHII
AAFRTDYAN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccgcaagagttactggagcatctggatccggagcagcgtgaggtcgccact
catttgcgcgggcccttatgtgtgcgtgccggtgcgggcaccggaaagactcgcgccatc
acctatcggatagcctatggggtgcacgcgggcgctttcgagccgaaccatgtacttgcc
gtgacattcaccgcgcgagccgccggtgagatgcgttcccgcctgcgcgatctcggagtg
tccggcgtcgtcgctcgtacctttcacgctgccgcactcagccagttgagctacttctgg
tccaccgcgataggtggacgcatgccgccggtcacggaacacaagggtgcactggtggca
caggccgcggcacggctcggcatgtcctacgaccgcgttgcggtgcgcgatctcaccgcg
gaaatcgagtgggcgaaggtttcactgatcacgcccgaggcgtatgcagaacgtgcggcg
gccgccggtcatattgatgtggctgggcattccgccgccgaaatcgtccagctgctacgt
gtgtatgaagaggttaaggaggacgcgcaccagatcgattttgaggatacgctcctgtat
ctggtcgggatccttctcgaccggccggatatcgcccggcagattcgtgggcagtatcgt
catttcacagtcgacgagtatcaggacgtctcacccctgcaacaccggcttttgcagctc
tggctgggcgaaagccgagaactctgtgtcgtcggcgatgtatcacagaccatttactcg
ttcacgggtgcctcctcgctctacctggcgcatttcaccgacgagttcaaggatgcgcgg
gttatagagctgatacgtgattaccgctcgacgcctcagatcgtcgctactgccaatgat
gtgatcgcctccgatgtgtccgaaggagcggtgcggctggtatcgcaggtcccttccggt
gtcccggtgaagtggaaggaatatgaggacgacgcggcggaagcggcggatatcgcaagc
aatattcgcgagttacagcttgcaggggtgccactgggagacatggcgattctgtaccgg
accaacgcccaatcggctgagttcgaggcggcgttgtccaacgtcggcgtgggctacacg
ctgcgcggctctgaacgtttcttctcccgccgcgaggtgcgggaagccatggttgctctg
cgggccgcggcacgctccggtgttcaggggccgctagcggacaatgttcgtgcgacactg
cggcaaatgggatggcgcgacgaggctcccgaggtggcgggtgcggtgcgggagaggtgg
gatgcgctcaatgcgctgctcaatctcgctacagaaatggaacatgtgcgctcggcaagc
atgctggatttcgttcgtgagttggaagaaagagcccagacgcagaacaccccggaggtg
gacggggtgacgctgtcgtcgctgcatgcggcgaagggcctggaatggcgtgtggtgttc
ttggcggggctcagcgaggggcttttgcccatctccttggcaaaacgtgccgccgatgtg
gcggaggagaggcgtttgctgtacgtcggggtgacccgcgcgaaagagcagctatacctc
tcgtatgcgaaaggaaacggatcgcgcgcggggaggaaggtatcgcggtttctctctccg
ctgtggccacgagaggagaagcccgtctctcgcgccaccagttatcggcagaggcgcacg
gcggaggctgcggctttcgtcgccgagcacggcgaggacgtggcgcttttcgaggagctg
gctgcctggcgtacggcacgtgcacgggaaatggggcgcccaccgtacaccgttttacac
gacacaaccctgcgtgcgatcgccatcgcaaaaccgatgacgttacccgcgctcggccgg
attaaaggaatcggcgataccaagctcgccagctggggagacgatatcctgcacattatt
gcggcattccgcaccgattacgccaattga
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