Actinokineospora sp. UTMC 2448: Actkin_00005
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Entry
Actkin_00005 CDS
T08397
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Actkin_00005 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_00005 (recF)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Actkin_00005 (recF)
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
DUF2813
Motif
Other DBs
NCBI-ProteinID:
UVS76324
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Position
5425..6573
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AA seq
382 aa
AA seq
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MHVRHLQVADFRSWERADLDLEPGPSVLVGRNGQGKTNLVEAVGYVATLSSHRVAADAPL
VRHGAQRAIVRLAVVNDDRELTVELEITPGKANRARVNRGAVGRPRDVLGILRTVLFAPE
DLALVRGDPGERRRFLDDLLVQRAPRYAGVRADYDKVLRQRNALLKSAAANRRARRADPE
ALSTLDVWDGHLAAHGAQLLAARLDLVAALRPRVAEAYAGVAPESAPARIAYRAGVGLPS
GYGDDMPADLAVVSDALLTAMAERRDAELERGVSLVGPHRDELELALGDLPAKGYASHGE
SWSFALALRLGSYELLRAEGSEPVLILDDVFAELDRARRERLAETALAAEQVIVTAAVAE
DVPEELDGARYRVADGEVQRVR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtccggcacttacaggtggccgacttccgctcgtgggagcgcgccgacctggac
ctggagccgggcccctcggtgctcgtcggccgcaacggccagggcaagaccaacctggtc
gaggcggtcggctatgtggcgaccctgtcatcgcaccgggtcgccgccgacgcgccgctg
gtccggcacggcgcgcagcgcgccatcgtgcggctggccgtggtcaacgacgaccgcgag
ctgaccgtggaactggagatcaccccgggcaaggccaaccgggcgcgggtcaaccgcggc
gcggtcggcaggccccgcgacgtcctgggcatcctgcgcacggtgctgttcgcgcccgag
gacctggccctcgtccgcggcgacccgggcgagcggcgccggttcctcgacgacctgctc
gtccagcgcgccccgcgctacgcgggggtgcgcgccgactacgacaaggtgctgcgccag
cgcaacgccctgctcaagagcgcggccgcgaaccggcgcgcgcgccgcgccgacccggag
gcgctgtccaccctcgacgtgtgggacggccacctcgccgcgcacggcgcgcagctgctc
gcggcccggctcgacctcgtcgccgcgctgcggccgagggtcgccgaggcctacgccggg
gtcgcgccggaatccgcgcccgcccgcatcgcctaccgcgccggtgtcgggctgccctcg
ggatacggcgacgacatgcccgcggacctcgccgtcgtgtccgacgcgctgctgaccgcc
atggccgagcgccgcgacgccgagctggagcgcggcgtcagcctggtcggcccgcaccgc
gacgagctggagctcgcgctcggcgacctcccggcgaaggggtacgccagccacggcgag
tcctggtccttcgcgctcgccctgcgcctaggctcctacgaactgctgcgcgccgagggc
agcgagccggtgctcatcctcgacgacgtcttcgccgagctcgaccgggcccggcgggag
cgcctcgccgagaccgcgctcgccgccgagcaggtgatcgtcaccgccgcggtcgccgag
gacgtgcccgaggagctggacggcgcgcggtaccgggtggccgacggggaggtgcagcgt
gtccgatga
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