Actinokineospora sp. UTMC 2448: Actkin_00007
Help
Entry
Actkin_00007 CDS
T08397
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actu03032
]
Actkin_00007 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_00007 (gyrB_1)
Enzymes [BR:
actu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Actkin_00007 (gyrB_1)
DNA replication proteins [BR:
actu03032
]
Prokaryotic type
DNA Topoisomerases
Actkin_00007 (gyrB_1)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Actkin_00007 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UVS76326
LinkDB
All DBs
Position
7484..9463
Genome browser
AA seq
659 aa
AA seq
DB search
MADKQENTYGAGSIGVLKGLEAVRLRPGMYIGSTAEPGLHHLIWEVVDNSVDEAMAGHAT
RVEVTLLADGGVRVDDDGRGIPVDEHPEEKRSALEVVMTVLHAGGKFDSDSYAVSGGLHG
VGISVVNALSTRLYAEVKRQGHVWRQEYRDSEPVTPVQRGEETEETGTSISFWPDGKIFE
TTTFNAETVARRLQEMAFLNKGLTISLRDERVSDEEAAEDVVGQAARVKERTFHYPGGLE
DFVKHINHAREPLHRNVIAFEAEDKDKGIQVEVAMQWNTGYSESVHTFANTINTPEGGTH
EEGFRAALTRVVNLYARDKKLLKEKDANLGGDDVREGLAAIVSVKLSEPQFEGQTKQKLG
NSEAKTFVQATCNEWLADWFERNPTEAKLIVTKAVSSAQARMAARKARELVRRKGALDIG
GLPGKLRDCRSTNPEECELYIVEGDSAGGSAKDGRDSRFQAILPIRGKIINVEKARIDRV
LKNTEVQSLITALGTGIQEDFDLAKLRYHKIVLMADADVDGKHITTLLLTLLFRFMRPLI
EHGHVYLSQPPLYKIKWQRSEPEYAYSDPERDGLLEAGIAAGKKINKEDGIQRYKGLGEM
NAEELWETTMDPANRLFLRVNLEDAAQADELFSVLMGEDVDARRSFITRNAKDVRFLDV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacaagcaggagaacacctacggtgccggttccatcggggtcctcaagggtctg
gaggccgtccgactccgccccggcatgtacatcggttccacggcagagccaggcctgcac
cacctgatctgggaggtcgtcgacaacagcgtcgacgaggccatggcaggccacgcgacc
agggtcgaggtcacgctgctggccgacggcggcgtccgggtcgacgacgacggccgcggc
atccccgtcgacgagcaccccgaggagaagcgctccgcgctcgaggtcgtcatgaccgtc
ctgcacgcgggcggcaagttcgacagcgacagctacgccgtctccggcggtctgcacggt
gtcggcatctccgtggtcaacgcgctgtccacccggctgtacgccgaggtcaagcgccag
ggccacgtgtggcgccaggagtaccgcgactccgagccggtcacccccgtgcagcgcggc
gaggagaccgaggagaccggcacctcgatcagcttctggccggacggcaagatcttcgag
accaccaccttcaacgccgagaccgtcgcccggcgcctgcaggagatggccttcctcaac
aagggcctgacgatctccctgcgcgacgagcgcgtctccgacgaggaggcggccgaggac
gtggtcggccaggccgcgcgggtcaaggagcgcacgttccactacccgggcgggctcgag
gacttcgtcaagcacatcaaccacgcccgcgagcccctgcaccgcaacgtcatcgccttc
gaggccgaggacaaggacaagggcatccaggtcgaggtcgcgatgcagtggaacaccggc
tacagcgagtcggtgcacaccttcgccaacacgatcaacacccccgagggcggcacccac
gaggagggcttccgcgcggcgctgacccgggtggtcaacctctacgcgcgcgacaagaag
ctgctcaaggagaaggacgccaacctcggcggcgacgacgtgcgcgagggcctggccgcg
atcgtgtcggtgaagctgtccgagccgcagttcgagggccagaccaagcagaagctgggc
aacagcgaggccaagacgttcgtccaggccacctgcaacgagtggctggccgactggttc
gagcgcaacccgaccgaggccaagctgatcgtcaccaaggcggtgtcctccgcgcaggcc
aggatggccgcgcgcaaggcccgcgagctggtccgccgcaagggcgcgctggacatcggc
ggcctgcccggcaagctgcgcgactgccgctcgaccaaccccgaggagtgcgagctctac
atcgtcgagggcgactcggcgggcggctcggccaaggacgggcgcgactcgcggttccag
gcgatcctgccgatccgcgggaagatcatcaacgtggagaaggcgcgcatcgaccgcgtg
ctgaagaacaccgaggtgcagagcctgatcaccgcgctgggcacgggcatccaggaggac
ttcgacctcgccaagctgcgctaccacaagatcgtgctgatggccgacgccgacgtcgac
ggcaagcacatcacgaccctgctgctcaccctgctgttccggttcatgcgcccgctcatc
gagcacgggcacgtgtacctgtcgcagccgcccctctacaagatcaagtggcagcgctcc
gagcccgagtacgcctactccgaccccgagcgcgacggcctgctcgaggcgggcatcgcc
gcgggcaagaagatcaacaaagaggacggcatccagcgctacaagggtctcggcgagatg
aacgccgaggagctgtgggagaccacgatggacccggccaaccggctgttcctgcgggtc
aacctcgaggacgccgcccaggccgacgagctgttcagcgtgctcatgggcgaggacgtc
gacgcccggcgctccttcatcacccgcaacgccaaggacgtccgcttcctcgatgtctga
DBGET
integrated database retrieval system
