Actinokineospora sp. UTMC 2448: Actkin_00008
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Entry
Actkin_00008 CDS
T08397
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actu03032
]
Actkin_00008 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_00008 (gyrA_1)
Enzymes [BR:
actu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Actkin_00008 (gyrA_1)
DNA replication proteins [BR:
actu03032
]
Prokaryotic type
DNA Topoisomerases
Actkin_00008 (gyrA_1)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Actkin_00008 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UVS76327
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Position
9530..12118
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AA seq
862 aa
AA seq
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MTETLPPPGDRIEPVDIQQQMQSSYIDYAMSVIVSRALPDVRDGLKPVHRRVLYSMYDTG
LRPERSYVKCSRVVGDVMGNYHPHGDSSIYDTLVRLAQPWSMRYPLVDGQGNFGSPGNDP
AAAMRYTEARLMPLAMDMLRDIGEDTVDFAPNYDGKTSEPKVLPARIPNLLVNGGSGIAV
GMATNIPPHNLREVADGVVWALDNPDADDEETLAQLMLRVKGPDFPTHGLILGTAGIEEA
YRTGRGSVRMRAVVEVEEDAKGRTILVVTELPYQVNPDNLIENMAQLVRDGKLTGISEIA
DESNRRSGMRIVIGLKRDAVAKVVLNNLYKHTQLQHTFGVNMLALVDGVPRTLRLDQIVR
HYVKHQIEVIVRRTRYRLRKAEERAHILRGYHKALDQLDEVIALIRRSPSADEARVGLMS
LLEVDEIQATAILELQLRRLAALERQRIIDELGEIERYIGELNAILASDERQRHIVRDEL
MEIVEKHGDDRRTRIVPFDGDVSVEDLIAVEDVVVTITRTGYAKRTKTDLYRAQKRGGKG
VQGAGLKQDDIVAHFFVCSTHDWILFFTNQGRVYRAKAYELPEANRAARGQHVANLLAFQ
PDETIAQVIQIKDYQVAPYLVLATKNGLVKKSRLADFDSNRSGGLIGINLREDDELVGAV
LCAADDDLLLISAGGQSIRFHADDDALRPMGRATSGVTGMRFNSGDELLTVGVVREDTFV
LVATRGGYAKRTPIGDYTAQGRGGKGVLTIQHDERRGRLVGALIVDESDELYAITSSGGV
IRTSAREVRKAGRQTKGVRLMNLGEGTTLVAIARSAEEPDDAIADGGVVEGAEGGVVEGG
GEIDGGVETDGTEAQTDAGSET
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccttgccgccgccaggcgatcgcatcgagccggtcgacatccagcagcag
atgcagagctcgtacatcgactacgcgatgagcgtgatcgtgtcccgggccctgccggac
gtccgcgacggcctcaagccggtccaccgccgcgtcctgtactccatgtacgacacgggc
ctgcgccccgaacgcagctacgtcaagtgctcccgcgtcgtcggcgacgtcatgggcaac
taccacccccacggcgactcgtcgatctacgacaccctcgtccgcctggcccagccctgg
tccatgcgctaccccctggtcgacggccagggcaacttcggctccccgggcaacgacccg
gcagccgccatgaggtacaccgaggccaggctcatgccgctggccatggacatgctgcgc
gacatcggcgaggacaccgtcgacttcgcgccgaactacgacggcaaaaccagtgagccc
aaggtcctgcccgcgcgcatcccgaacctgctggtcaacggcggcagcggcatcgccgtc
ggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgccgacggtgtcgtctgg
gcgctggacaaccccgacgccgacgacgaggagacgctggcgcagctcatgctgcgggtc
aaggggccggacttcccgacgcacgggctgatcctggggaccgcgggcatcgaggaggcc
taccggaccggccgggggtcggtgcggatgcgggcggtcgtcgaggtcgaggaggacgcc
aaggggcgcacgatcctcgtcgtcaccgagctgccctaccaggtcaacccggacaacctg
atcgagaacatggcgcagctggtgcgcgacggcaagctcaccggcatctccgagatcgcc
gacgagtccaaccggcgcagcggcatgcgcatcgtcatcgggctcaagcgcgacgccgtc
gccaaggtcgtgctgaacaacctctacaagcacacccagctgcagcacacgttcggcgtc
aacatgctggccctggtcgacggcgtgccgcgcacgctgcggctggaccagatcgtgcgc
cactacgtgaagcaccagatcgaggtcatcgtccggcgcacgcgctaccggctgcgcaag
gccgaggagcgcgcccacatcctgcgcggctaccacaaggcgctcgaccagctcgacgag
gtcatcgccctgatccgccggtcgccgtcggccgacgaggcgcgcgtgggcctgatgtcg
ctgctcgaggtcgacgagatccaggcgaccgcgatcctggagctgcagctgcgccgcctc
gccgccctggagcggcagcggatcatcgacgagctcggcgagatcgagcgctacatcggc
gagctgaacgcgatcctggccagcgacgagcgccagcgccacatcgtgcgcgacgagctg
atggagatcgtcgagaagcacggcgacgaccggcgcacccggatcgtgccgttcgacggc
gacgtgtcggtcgaggacctgatcgcggtcgaggacgtcgtcgtcaccatcacccggacc
gggtacgccaagcgcaccaagaccgacctgtaccgggcgcagaagcgcggcggcaagggc
gtgcagggcgcggggctcaagcaggacgacatcgtggcgcacttcttcgtgtgctccacc
cacgactggatcctgttcttcaccaaccagggtcgtgtctaccgcgcgaaggcgtacgag
ttgcccgaggccaaccgggccgcgcgcgggcagcacgtggcgaacctgctggcgttccag
cccgacgagaccatcgcccaggtcatccagatcaaggactaccaggtcgcgccgtacctg
gtgctggccacgaagaacggcctggtgaagaagtcgcgcctggccgacttcgacagcaac
cgatcaggtggtctcatcggtatcaacctgcgtgaggacgacgagctggtcggcgcggtg
ctgtgcgcggccgacgacgacctgctgctcatctccgcgggcggccagtccatccgcttc
cacgccgacgacgacgcgctgcgcccgatgggccgggcgacctccggcgtcaccggcatg
cggttcaactccggcgacgagctgctcaccgtgggcgtggtccgagaggacacgtttgtt
ttggtcgcgacccggggtgggtacgccaagcgcacgccgatcggggactacacggcccag
ggtcgcggcggcaagggcgtgctcaccatccagcacgacgagcggcgtgggaggctggtg
ggagcgctgatcgtcgacgagagcgacgagctgtacgcgatcacgtcctcgggcggcgtc
atccggaccagcgcccgcgaggtgcgcaaggcgggccgccagacgaagggcgtgcggttg
atgaacctgggagaggggaccaccctggtagccatcgcccgcagcgccgaggagcccgac
gacgccatcgccgacggcggtgtcgtggagggcgccgagggcggtgtcgtcgaaggcggc
ggcgagatcgatggcggtgtcgagaccgatggcacagaggcgcagaccgacgcaggcagc
gagacgtag
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