Actinokineospora sp. UTMC 2448: Actkin_00530
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Entry
Actkin_00530 CDS
T08397
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_00530 (vsr)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Actkin_00530 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
ThiN
Motif
Other DBs
NCBI-ProteinID:
UVS76835
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Position
complement(536492..537235)
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AA seq
247 aa
AA seq
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MTGPPARAWRPRPGRTRALVEAEQDKAAGGAHRRAVRVETGETARGHVLLKASGGVVRAY
LRWRSNGRSVVRALGPVDGETRMANLAEGWERARAAGLVGDEVRPPGSWASSPAARATMR
ANRGRDTLPERRLRALLHRRGLRYRVSFRPLPDFRRTADIVFPGARVAVFVDGCYWHGCP
DHYQESATNSAFWRDKIATNVRRDRETTRVLEEQGWTVVRCWEHEEPSVAAERVFHALDE
ANGRGKR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaccgcccgcgcgagcctggcggccccgaccggggcgcacccgggccctggtc
gaggcggagcaggacaaggcggcgggcggcgcgcaccggcgggcggtgcgcgtcgagacg
ggcgagaccgcgcgcggccacgtgctgctcaaggcatcgggcggcgttgtccgcgcctac
ctgcgctggcgctccaacggccgatcggtggtgcgggcactcggcccggtggacggcgag
accaggatggcgaacctggcggaaggctgggaacgcgcgcgggcggccggtctcgtcggt
gacgaggtgcggccgcccgggtcctgggcgtcatcgccagcggcgcgcgccacgatgcgg
gccaaccgggggcgcgacaccttgccggaacgcaggctgcgggcgctgctgcaccgacgg
ggtctgcgataccgggtctcgtttcgcccgctgccggacttccggcgcacggcggacatc
gtgttcccgggcgcccgggtcgcggtgttcgtcgacggctgctattggcacggatgcccc
gaccactaccaggagtcggcgacgaactccgccttctggcgcgacaagatcgccaccaac
gtgcgtcgggaccgggagaccacccgggtgctcgaagagcaggggtggaccgtggtgcgg
tgctgggagcacgaggagccgagcgtcgccgccgaacgggtcttccacgcgctcgacgag
gcgaacggccgggggaaacgctga
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