Actinokineospora sp. UTMC 2448: Actkin_00739
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Entry
Actkin_00739 CDS
T08397
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_00739 (sbcC)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Actkin_00739 (sbcC)
Archaeal homologous recombinant proteins
Actkin_00739 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UVS77037
LinkDB
All DBs
Position
complement(757002..759917)
Genome browser
AA seq
971 aa
AA seq
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MRLHRLELAAFGPYPGREVVDFDVLAAEGLFLLHGDTGAGKTSLLDAVSFALFGSVPGVR
DQAKQLRCDNAPETVHTEVSLELTVRGRRFRVAHSPEYARPKRRGTGFTKQQATASLTWL
DGTGEPLTRIDEVGRTVQHLLGMTKEQFFQVVLLPQGEFARFLRSDTAEREKLLERLFGT
EHFKRVEDWFSAKRKESRTRVERARVLADQLAGRVAQVVAAEPPAEPDEAWLTAVVSTVE
SEAAATAAGQAAAARERARAEAALADGRALADRVRRVRRAQQELAEVAAQADDRAAWADE
LGAARRAAGVVAAVDTLRAVERQAELAADAERHRVREAVALGWTEADPPRAAANALREEA
GELAGLVAEAERQRDDEARLAELDTRLASTDWDALGAEADSLTVAVAEARDAVADAARAA
ATVDGLRAAAESAATAVRHAAELPAAERALAEALEAHAAAVDAHQDARDRLLDVRQRRLA
GMAAELAAMLDGPCPVCGSLDHPAPAAAADAVSAADEERAQEAEQRALRLRDRAADALRQ
ARGAVETLRDRLAGWDDPVAAHQSAKQACEAAERLARLHPARVAELAALERKVEDVGRRQ
ARLAKDVASWQAERAEVAARVAERAVRLAAARGAFASVAERRTRLLELGAALDAVADARA
FTATVAERVDEQRAAVADAVLLAGFADLPSALGAAREDEIMAKLDTQLADARLRESTNQE
ILADPDLWGVDADTVVDLPPLVAAADAARERAEEAVADARAAAARAEALAGLTDRLQKAW
RDLAPLTAEFAELDALTDVVNGRGQNTARMSLRAYVLAARLEEVAVAATDRLRRMTQGRY
AFVHSDEAGARGTRGGLGLDVLDDFTGRVRSSKTLSGGESFVASLALALGLADVVAAETG
GAVLDTLFVDEGFGALDADTLDDVMSILDELRAGGRVVGVVSHVEELRQRIPVRLRVRKA
RTGPTLELVSG
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccggctggagctggcagcgttcgggccgtacccgggccgcgaggtcgtc
gacttcgacgtgctcgccgccgagggcctgttcctgctgcacggcgacaccggcgcgggc
aagacgtcgctgctggacgcggtgtcgttcgccctgttcggcagcgtgccgggggtgcgc
gaccaggccaagcagctgcgctgcgacaacgcgcccgagaccgtgcacaccgaggtgtcg
ctggagctgaccgtgcgcggcaggcgtttccgcgtcgcgcacagcccggagtacgcgcgg
cccaagcggcgcgggaccggcttcaccaagcagcaggcgacggcgtcgctgacctggctc
gacggcacgggcgagccgctgacccgcatcgatgaggtggggcggaccgtccagcacctg
ctggggatgaccaaggagcagttcttccaggtcgtgctgctgccgcagggcgagttcgcg
cggttcctgcggtcggacaccgccgagcgcgagaaactgctggagcggctgttcggcacc
gagcacttcaagcgggtcgaggactggttctccgccaagcgcaaggagtcgcggaccagg
gtcgagcgggcgcgcgtgctggccgaccagctcgcgggccgggtcgcccaggtcgtggcc
gccgagccgccagcggagccggacgaggcgtggctgaccgccgtggtgtccactgtggag
tccgaagccgcggcgacggcggccgggcaggccgctgctgcccgggagcgggccagggcc
gaggccgcgctggccgacggccgcgcgctggccgaccgggtgcgccgggtgcggcgggcc
cagcaggagctggccgaggtggccgcgcaggccgacgaccgggcggcgtgggccgacgag
ctgggcgcggcccggcgcgctgctggcgtggtcgccgccgtggacaccctgcgggccgtg
gagcgtcaggcagagcttgccgccgacgccgagcgccaccgcgtgcgggaggcggtcgcg
ctgggctggacggaggccgacccgccccgcgccgcggccaacgcgctgcgcgaggaggcg
ggcgagctggccggtctggtcgccgaggccgagcgccagcgcgacgacgaggcccggctc
gccgaactggacacccggctggccagtaccgactgggacgcgctgggcgccgaggccgac
tcgctgaccgtcgccgtcgccgaggcccgcgacgccgtggcggacgcggcccgcgccgcg
gccactgtggacggcctgcgggccgcggccgagtccgcggcgaccgccgtgcgccacgcc
gccgagctgcccgccgccgaacgcgcgctcgccgaggccctcgaggcgcacgccgccgcg
gtggacgctcaccaggacgcgcgcgaccgcctgctggacgtgcgccagcggcggctggcc
gggatggccgccgagctggccgcgatgctggacggcccgtgcccggtctgcggctcgctc
gaccaccccgcgcccgcggccgccgcggacgccgtctccgccgccgacgaggaacgcgcg
caggaggccgagcagcgcgcgctgcggctgcgcgaccgcgcggcggacgcgctgcgccag
gcccgtggcgcggtggagaccctgcgcgaccggctcgccgggtgggacgaccccgtcgcc
gcccatcagagcgcgaagcaggcgtgtgaggcggccgagcggctggcccggctgcacccg
gcccgggtcgccgagctggcggcgctggagcgcaaggtcgaggacgtgggcaggcggcag
gcccggctggccaaggacgtggcgtcgtggcaggccgagcgcgccgaggtcgccgcccgg
gtcgccgagcgggcggtccggctggcggcggcccggggcgcgttcgcctcggtcgccgag
cggcggacccggctgctggagctgggcgcggcgctcgacgccgtcgccgacgcccgggcg
ttcaccgcgacggtcgccgagcgggtcgacgagcagcgggcggcggtggccgacgccgtg
ctcctggccgggttcgccgacctgccgtcggccctcggcgccgcccgcgaggacgagatc
atggccaagctggacacccagctcgcggacgcgcggctgcgggagtccaccaaccaggag
atcctcgccgatcccgacctgtggggcgtggacgccgacacggtggtcgacctgccgccg
ctggtcgccgcggcggacgcggcgcgggagcgcgccgaggaggccgtggcggacgcgcgg
gccgccgcggcgcgggccgaggcgctggcgggcctgaccgaccggctgcagaaggcctgg
cgcgacctcgcgccgctgaccgccgagttcgccgagctggacgcgctgaccgatgtggtg
aacggccggggccagaacaccgcgcgcatgtcgctgcgcgcgtacgtgctggcggcccgg
ctggaggaggtggccgtcgccgccaccgaccggctgcgccggatgacccagggccgctac
gccttcgtgcactccgacgaggcgggcgcccggggcacgcgcggcggcctcggcctggac
gtgctggacgacttcaccgggcgcgtacgctcgtcgaagacgctctccggcggcgagtcg
ttcgtcgcgtcgctggcgctggccctcggcctggccgacgtggtggccgccgagaccggc
ggcgccgtgctggacacgctgttcgtcgacgagggcttcggcgcgctcgacgcggacacc
ctggacgacgtgatgtccatcctggacgagctgcgggcgggcgggcgggtcgtcggcgtg
gtgtcgcatgtggaggagctgcgccagcgcattccggtccggctgcgggtgcgcaaggcg
cgcaccggcccgacgctggagctggtcagcgggtga
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