Actinokineospora sp. UTMC 2448: Actkin_01008
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Entry
Actkin_01008 CDS
T08397
Symbol
yhcR
Name
(GenBank) Endonuclease YhcR precursor
Organism
actu
Actinokineospora sp. UTMC 2448
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Exo_endo_phos
LTD
Metallophos_2
Rng_hyd_C
DUF4131
Motif
Other DBs
NCBI-ProteinID:
UVS77300
LinkDB
All DBs
Position
complement(1058965..1063209)
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AA seq
1414 aa
AA seq
DB search
MRNSSSARLVAGVAVMATAAAVGVVPALADPTGPSISEIHYDNAGTDTGEAIEIDAPPGF
DLAGWQIVLYNGSGGAAYDTRALTGTVPAAGVVVETYPANGVQNGSPDGVALVRPDGTVA
EFLTYEGSFTASGGPANGMAGTDIGVAETADTPVGHSLQKVDGAWQAPAAHTFGARNGGG
SPDPDPDPIGCDVPVDRTIAEVQGTGAASPLVGTTVTVEGVVTADHRTGGYNGIYVQTEG
SGDRAPSAGTASDGLFVFLTSNPANHPDVAIGDRVRVRGGVSEYFGLTQITSTSVQVCAH
DAPLPAAVPLSLPMDAAARESAESMLVAPLGAFTVSEVYNTNRFGEVVLAAGDQAARIPT
DLHRPGTPEAQALAAANKAGRLLVDDGSSRNLANAGVAPPYVYPDAPLRVGDAVEAFAPS
VLSYGFDEWRLQPTRPVDASTPAIGRTTFKQANPRTPAPEAVGGDIQVAAFNVLNYFVHF
GGEARGAEDEAGLARQEAKIVSAITALGAEVVALQEIENSVRFDAADPQKALKRLVAALN
ATEGAGTWDYVRTPAELPAPEQQDVITTAIIFKPGAVTPVGAAKSVNDESVWFNAREPIA
QTFRSDALTFTVVANHLKSKSAGGATGDNVDTGDGQGAYNGDRTRQARALVQFASGLENP
ILLGDFNSYTAEDPMQVFYEAGYTDLNADSEATYVFGGESGSLDHGLAGSGLREVVTGVD
VWQINSHESYAFQYNGLAEFYAPDPYRASDHNPIVLGLETSGTVELQLLSINDFHGRLES
PGKTADGKPIGGAAQLAGLVDTLRAQNPNTLFLSAGDNIGASTFVSAIDNDNPTIDALNL
MGLDASAVGNHEFDKGMADLTGRVVPRAEFPLLGANVYRGDERALPAYEVKDVSGVKVGI
VGVVTEQTASLVSPDGIAGLTFRDPAAEAAAVAGQLKDGDAANGEADVVVLLAHEGAATE
NIGSIDELKSDDVFKDFMNLGGDVDVIFSGHTHQPYAFVDGQRPVVQAGDYGKLVGRATL
TVDLASKDIVGAGSNLVDVVGAPEDAAVAQLVADAKKRAEELGKQPLGSITADIKRAYTE
SGNEDRGKESVLGNFIADVQLAGTAEPGRGGAQIAFMNPGGLRSDLIHAPDGVVTYAEAF
AVQPFANDVVTKTYTGAEIKQVLEEQWQPAGASRPVLWLGVSKGFRYLYLPENPQGSRIT
GMWLNDQPIDPAGTYRVTVNSFLASGGDNFRTLAGGTDRATTGNNDLTMLVDYFAANSPI
TADTAPRSAVGVPAPVCDETITGRRTGPLVVSSGLTCLDGAEILGPVVVRPGASLVATGG
RIAGPVAAVRPESFVLDGTRVAGTVSVSGATGAVSIEDAHVSGPVALTGNTGGVVVAGNT
VNGPLACSGNTPAPVNEDRPNTVRGPAAGQCRDL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacagcagcagcgccagactcgtcgcgggggtcgccgtcatggccaccgcggcg
gcggtgggcgtggtcccggcgttagccgacccgaccggaccctcgatcagtgagatccac
tacgacaacgctggcaccgacaccggcgaggccatcgagatcgacgccccaccgggcttc
gacctcgcgggctggcagatcgtcctctacaacggcagcggcggcgcggcctacgacacg
cgcgcgctgaccgggaccgtccccgccgcgggcgtggtcgtcgagacctacccggccaac
ggcgtgcagaacggctcccccgacggcgtcgccctggtccgcccggacggcaccgtcgcg
gagttcctgacctacgagggctcgttcaccgccagcggcggccccgccaacggcatggcg
ggcaccgacatcggcgtcgccgagaccgcggacaccccggtgggccactcgctgcagaag
gtcgacggtgcctggcaggccccggccgcgcacaccttcggcgcgcgcaacggcggcggc
tcgcccgaccccgacccggacccgatcggctgcgacgtccccgtcgaccgcacgatcgcc
gaggtgcagggcaccggcgcggcgtcgccgctggtcggcaccacggtcaccgtcgagggc
gtcgtcaccgcggaccaccgcaccggcggctacaacggcatctacgtgcagaccgagggc
tccggcgaccgcgccccctcggctggcaccgcctccgacggcctgttcgtgttcctgacc
agcaacccggccaaccaccccgacgtcgccatcggcgaccgggtgcgggtgcgcggcggc
gtcagcgagtacttcggcctcacccagatcaccagcacgtccgtgcaggtgtgcgcgcac
gacgcgccgctgcccgccgccgtgccgctgagcctgccgatggacgcggcggcccgggag
tcggccgagtcgatgctggtggccccgctcggcgcgttcaccgtgtccgaggtctacaac
accaaccgcttcggcgaggtcgtgctggcagccggtgaccaggccgcgcgcatcccgacc
gacctgcaccgcccgggcaccccggaggcgcaggcgctggccgcggccaacaaggcgggc
cgcctgctggtcgacgacggctccagccggaacctggccaacgcgggcgtcgcgccgccg
tacgtctaccccgacgccccgctgcgcgtcggcgacgcggtcgaggcgttcgcgcccagc
gtgctgtcctacggcttcgacgagtggcgcctgcagccgacccgcccggtcgacgcgagc
accccggccatcggccgcaccaccttcaagcaggccaacccgcgcaccccggcgccggag
gcggtcggcggcgacatccaggtcgcggcgttcaacgtgctgaactacttcgtccacttc
ggtggcgaggcccgcggcgccgaggacgaggccgggctggccaggcaggaggcgaagatc
gtctcggcgatcaccgcgctgggcgcggaggtcgtggcgctgcaggagatcgagaactcg
gtgcgcttcgacgcggccgacccgcagaaggcgctcaagcgcctggtcgccgcgctgaac
gcgaccgagggcgcgggcacgtgggactacgtgcgcacgcccgccgagctgcccgccccc
gagcagcaggacgtcatcaccacggcgatcatcttcaagcccggcgcggtcaccccggtc
ggcgcggcgaagtcggtcaacgacgagtcggtgtggttcaacgcgcgcgagccgatcgcg
cagacgttccgctcggacgcgctgacgttcaccgtcgtggccaaccacctcaagtccaag
agcgcgggcggcgcgaccggcgacaacgtcgacaccggtgacggccagggcgcctacaac
ggcgaccgcacccgtcaggcgcgggcgctggtgcagttcgcgtccggcctggagaacccg
atcctgctcggcgacttcaactcctacaccgccgaagacccgatgcaggtcttctacgag
gccggctacaccgacctcaacgcggacagcgaggccacctacgtcttcggcggcgagtcc
ggctcgctcgaccacggcctggccggatccggcctgcgcgaggtcgtgaccggcgtcgac
gtctggcagatcaactcgcacgagtcctacgcgttccagtacaacggcctcgccgagttc
tacgcgccggacccgtaccgggccagcgaccacaacccgatcgtgctgggtctggagacc
tcgggcaccgtcgagctgcaactgctgtccatcaacgacttccacggcaggctggagtcg
ccgggcaagaccgccgacggcaagcccatcggcggcgcggcgcagctcgccgggctggtc
gacacgctgcgcgcgcagaacccgaacacgctgttcctctccgcgggcgacaacatcggc
gcgtcgacgttcgtctcggcgatcgacaacgacaacccgacgatcgacgcgctcaacctg
atgggcctcgacgcctccgcggtcggcaaccacgagttcgacaagggcatggccgacctg
accggccgtgtcgtgccgcgcgctgagttcccgctgctgggcgccaacgtctaccgcggc
gacgagcgcgcgctgcccgcctacgaggtcaaggacgtctccggcgtcaaggtcggcatc
gtcggcgtggtgaccgagcagaccgcgtcgctggtcagcccggacggcatcgcgggcctg
accttccgcgacccggcggccgaggccgccgcggtggccggtcagctcaaggacggcgac
gccgccaacggcgaggccgacgtggtggtgctgctcgcgcacgagggcgcggccacggag
aacatcggctccatcgatgagctcaagtccgacgatgtgttcaaggacttcatgaacctc
ggcggcgacgtggatgtgatcttcagcggccacacccaccagccgtacgccttcgtcgac
gggcagcgcccggtcgtgcaggcgggcgactacggcaagctggtcggccgcgccacgctg
accgtcgacctggcgtcgaaggacatcgtgggcgcgggctcgaacctggtggacgtcgtc
ggcgcgccggaggacgccgccgtcgcgcagctcgtcgccgacgccaagaagcgcgccgag
gagctgggcaagcagccgctgggctcgatcaccgccgacatcaagcgggcctacaccgag
agcggcaacgaggaccggggcaaggagtcggtgctcggcaacttcatcgccgacgtccag
ctcgcgggcaccgccgagccgggtcgcggcggcgcgcagatcgcgttcatgaacccgggc
ggcctgcgctccgacctgatccacgccccggacggcgtggtgacgtacgcggaggcgttc
gcggtccagccgttcgccaacgacgtggtcaccaagacctacacgggcgcggagatcaag
caggtgctggaggagcagtggcagccagcgggcgcgtcccgtccggtgctgtggctgggc
gtgtcgaagggtttccggtacctgtacctgccggagaacccgcagggctcgcggatcacc
ggcatgtggctcaacgaccagccgatcgacccggcgggcacgtaccgggtcacggtgaac
tcgttcctggcctccggcggtgacaacttccgcacgctggctggcggcaccgaccgggcg
acgaccggcaacaacgacctgacgatgctggtcgactacttcgccgcgaactcgccgatc
accgccgacaccgccccgcgctcggccgtgggcgtcccggcgccggtctgcgacgagacg
atcaccgggcggcgcaccggcccgctggtggtctcctccggcctgacctgcctcgacggc
gccgagatcctcggcccggtcgtggtgcggccgggcgcgtcgctggtggcgaccggcggg
cggatcgcgggcccggtcgcggccgtgcggccggagtcgttcgtcctggacggcacccgg
gtcgcgggcacggtctcggtcagcggcgccaccggcgcggtctcgatcgaggacgcgcac
gtgtccggcccggtcgcgctgaccggcaacaccggcggcgtggtcgtcgccgggaacacg
gtcaacggtccgctggcctgctcgggcaacacgcccgcgccggtgaacgaggaccgcccg
aacaccgtccgcggcccggccgccggacagtgccgcgacctgtaa
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