Actinokineospora sp. UTMC 2448: Actkin_01122
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Entry
Actkin_01122 CDS
T08397
Symbol
ypfD_1
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Actkin_01122 (ypfD_1)
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
HHH_6
ALIX_LYPXL_bnd
HHH
SPICE
Motif
Other DBs
NCBI-ProteinID:
UVS77412
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Position
complement(1186189..1188723)
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AA seq
844 aa
AA seq
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MTVQSITGRIAEQLGVREGQVVAAVDLLDGGATVPFIARYRKEVTGALDDEQLRTLEERL
RYLRELEERRTAILESIREQGKLDDALTAQIMAADSKARLEDIYLPYKPKRRTKAQIARE
NGLEPLADALLGDPTLDPRATAAAYLGENVADEAAALEGARAILVERFGEDADLIGELRE
RMWTRGAMVSKVREGKETDGAKFADYFDFSEPLAKLPSHRVLALYRGEKEEVLDLTLDPD
PDADPLARSDYEVRIAARFGVADQGRAADKWLMDTVRWAWRTRILVHLGIDLRGRLRQEA
EDEAVRVFAANLRDLLLAAPAGTRATLGLDPGFRTGVKVAVVDATGKVVDTATIYPHVPQ
QRWDESLAVLAKLCAKHRVELVAIGNGTASRETDKLAGDLIKRFPELRLTKVMVSEAGAS
VYSASAYATQELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDISEVKLSR
SLDAVVEDCVNGVGVDVNTASVPLLTRVSGIGASLAENIVAHRDANGPFRSRTGLKEVPR
LGAKAFELCAGFLRIRGGDDPLDASSVHPESYPVVRRILASTGGDLTGLIGNTATLRSLK
PSSFVDETFGLPTVTDILAELEKPGRDPRPAFTTATFAEGVETLADLRPGMTLEGVVTNV
AAFGAFVDIGVHQDGLVHVSALSKTFVKDPRDVVKSGDVVKVKVLDVDIPRKRISLTLRL
DDEVQPGGANGSGGPGQRGRGQGSQPDRGRRGQGDRTQRGQGGAGGQGNAGGQSSGGRGG
QGGSGGHGSPGDRGQGQGDRANRSQNRNGDGHRTGQRGTKPNRDRRDAPSGAMAEALRRA
GYKG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcagagcatcaccggtcggatcgccgagcagctcggggtgcgggaaggacag
gtcgtcgcggccgtcgacctgctcgacggcggggcgaccgtgccgttcatcgcccggtac
cgcaaggaggtcaccggcgcgctggacgacgagcagctgcgcaccctggaggagcgcctg
cgctatctgcgcgagctggaggaacggcggacggcgatcctggagtccatccgggaacag
ggcaaactggacgacgcgctgaccgcccagatcatggcggcggactccaaggcccggctt
gaggacatctacctgccctacaagcccaagcggcgcacgaaggcccagatcgcccgcgag
aacgggctcgagccgctggccgacgcgctgctgggcgacccgacgctggacccgcgcgcc
acggccgcggcgtacctcggcgagaacgtcgccgacgaggccgccgcgctggagggcgcg
cgggccatcctggtcgagcgcttcggcgaggacgccgacctgatcggcgagctgcgcgag
cgcatgtggacccgcggcgcgatggtgtcgaaggtgcgcgagggcaaggagaccgacggc
gccaagttcgccgactacttcgacttcagcgagccgctggccaagctgccctcgcaccgc
gtgctcgcgctgtaccgcggggagaaggaggaggtgctcgacctcaccctcgaccccgac
ccggacgcggacccgttggcccgcagcgactacgaggtgcgcatcgccgcccggttcggc
gtggccgaccagggccgcgcggccgacaagtggctgatggacacggtgcgctgggcgtgg
cgcacgcgcatcctggtgcacctgggcatcgacctgcgcggacggctgcggcaggaggcc
gaggacgaggccgtgcgcgtcttcgccgcgaacctgcgcgacctgctgctcgccgcgccc
gccgggacccgcgccacgctcggcctcgaccccggcttccgcaccggcgtcaaggtcgcc
gtcgtcgacgcgaccggcaaggtggtcgacactgccacgatctacccgcacgtgccgcag
cagcgctgggacgagtcgctggcggtgctggcgaagctctgcgccaagcaccgcgttgag
ctggtggccatcggcaacggcacggcgtcgcgggagaccgacaagctggcgggcgacctg
atcaagcggttccccgagctgcggctgacgaaggtgatggtgtcggaggcgggcgcgtcg
gtgtactcggcgtcggcctacgcgacccaggagctgcccgacctcgacgtgtcgctgcgc
ggcgcggtctcgatcgcgcggcggctgcaggacccgctggcggagctggtgaagatcgac
ccgaagtcgatcggcgtcgggcagtaccagcacgacatctccgaggtgaagctgtcgcgc
tcgctggacgcggtggtcgaggactgcgtgaacggcgtcggcgtcgacgtcaacaccgcg
tcggtcccgctgctgacccgggtgtcgggcatcggggcgtcgctggcggagaacatcgtc
gcccaccgcgacgccaacgggccgttccgctcgcgcacggggttgaaggaggtgcctcgg
ctgggcgcgaaggcgttcgagctgtgcgcgggcttcctccgcatccgcggcggcgacgac
ccgctggacgcctccagcgtccacccggagtcctacccggtggtccgccgcatcctggcc
tccaccggcggtgacctgacgggcctgatcggcaacacggcgaccctgcgctcgctgaag
ccgtcgtcgttcgtggacgagaccttcggcctgccgacggtcaccgacatcctcgccgaa
ctcgagaagcccggccgcgacccccgcccggccttcaccaccgcgaccttcgccgaaggc
gtggaaaccctggccgacctgcgccccggcatgaccctcgaaggcgtggtcaccaatgtg
gccgccttcggcgcctttgtggacatcggcgtccaccaggacggcctggtccacgtgtcg
gccctgtcgaagacgttcgtgaaggacccgcgcgacgtggtgaagtccggggacgtggtc
aaggtgaaggtgctggacgtggacatcccacgcaagcgcatctccctgaccctgcgcctg
gatgacgaggtgcagcccggtggcgcgaacggctccggcggccccggccagcgcggccgc
ggccagggctcccagcccgaccgaggccgacgcggccagggcgaccgaacccagcgcggc
cagggcggcgctggcggccagggcaacgctggcggccagagcagcggcggccgcggcggc
cagggcggcagcggcggccacggcagcccgggagaccgcggtcaaggccaaggcgaccga
gccaaccgcagccagaaccgaaacggcgacggccaccgcacgggccagcgcggcaccaaa
cccaaccgcgaccgccgcgacgccccctccggcgccatggccgaagccctccgccgagcc
ggctacaagggctaa
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