Actinokineospora sp. UTMC 2448: Actkin_01234
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Entry
Actkin_01234 CDS
T08397
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Actkin_01234 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actu03019
]
Actkin_01234 (orn)
03009 Ribosome biogenesis [BR:
actu03009
]
Actkin_01234 (orn)
Messenger RNA biogenesis [BR:
actu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Actkin_01234 (orn)
Ribosome biogenesis [BR:
actu03009
]
Eukaryotic type
Pre-60S particles
RNases
Actkin_01234 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UVS77521
LinkDB
All DBs
Position
complement(1303510..1304118)
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AA seq
202 aa
AA seq
DB search
MTDRLVWIDCEMTGLDLGRDALIEIAALVTDSELNVLGDGVDLVIHASDEALAGMPEVVA
EMHARSGLTEEVRASTLTLADAERAVLDYVRQHVPEVRSAPLCGNSIATDRGFISRDMPS
LDAHLHYRMVDVSSIKELARRWYPRVYYAQPDKGLAHRALADIQESIRELRYYRGTVFVP
QPGPTTDEAKAVAGTLLVNPQA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaccgcttggtatggatcgactgcgagatgaccggcctcgacctcggccgcgac
gccctgatcgagatcgccgccctggtcaccgactccgagctgaacgtcctcggcgacggc
gtcgacctggtcatccacgcctccgacgaggcgctcgcggggatgccggaggtcgtcgcc
gagatgcacgcgcgctccgggctcaccgaggaggtccgcgcctcgacgctcaccctggcc
gacgccgagcgcgcggtgctggactacgtgcgccagcacgtccccgaggtccgctccgcg
ccgctgtgcggcaactccatcgccaccgaccgcggcttcatcagccgggacatgccgtcg
ctggacgcccacctgcactaccgcatggtggacgtgtcgtcgatcaaggagctggcccgc
cgctggtacccgagggtgtactacgcgcagccggacaagggcctggcccaccgcgccctg
gccgacatccaggagtcgatccgggagctgcgctactaccgcggcacggtcttcgtcccg
cagccgggaccgaccacggacgaggccaaggcagtggccgggaccctgctggtcaacccc
caggcataa
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